RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 PTK7Q13308 1070 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 SPARCL1Q14515 664 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 FSCN1Q16658 493 aaKnown RBP15.59■□□□□ 0.09
UBXN11-213ENST00000472155 PAN2Q504Q3 1202 aaKnown RBP15.59■□□□□ 0.09
UBXN11-213ENST00000472155 CYB5D1Q6P9G0 228 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 CXCL17Q6UXB2 119 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 LIMS2Q7Z4I7 341 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 USP6NLQ92738 828 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 RTP4Q96DX8 246 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 GAD1Q99259 594 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 ARL2BPQ9Y2Y0 163 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 USP3Q9Y6I4 520 aa15.59■□□□□ 0.09
UBXN11-213ENST00000472155 BCLAF3A2AJT9 711 aaKnown RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 MFSD11O43934 449 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 TOP3BO95985 862 aaKnown RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CD4P01730 458 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 NME3Q13232 169 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 BMPR2Q13873 1038 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 GALNTL6Q49A17 601 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 PLEKHG4Q58EX7 1191 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CDHR3Q6ZTQ4 885 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 PPM1NQ8N819 430 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 BANPQ8N9N5 519 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CRTAC1Q9NQ79 661 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 PAK5Q9P286 719 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 MRPL42Q9Y6G3 142 aaKnown RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 NUP205Q92621 2012 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 FAM72CH0Y354 149 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CHADO15335 359 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 RPL34P49207 117 aaKnown RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 ZNF157P51786 506 aaPredicted RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CRYBB1P53674 252 aaPredicted RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 NR1H3Q13133 447 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 PDK4Q16654 411 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 FAM72AQ5TYM5 149 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 HHATQ5VTY9 493 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 FAM72DQ6L9T8 149 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CLEC20AQ6ZU45 233 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 DENND5BQ6ZUT9 1274 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 FAM72BQ86X60 149 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 CTAGE3PQ8IX95 158 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 ZNF75CPQ92670 426 aaPredicted RBP15.58■□□□□ 0.08
UBXN11-213ENST00000472155 ECT2Q9H8V3 914 aa15.58■□□□□ 0.08
UBXN11-213ENST00000472155 UNCXA6NJT0 531 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 F7P08709 466 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 PYGBP11216 843 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 PTPN1P18031 435 aaKnown RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 CLCNKBP51801 687 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 XRCC4Q13426 336 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 OTOAQ7RTW8 1153 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 PPP1R10Q96QC0 940 aaKnown RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 CYTH2Q99418 400 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 ARHGAP39Q9C0H5 1083 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 AP5M1Q9H0R1 490 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 ZC3H7BQ9UGR2 993 aaKnown RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 SMG5Q9UPR3 1016 aaKnown RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 CDY2AQ9Y6F7 541 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 MYBPHLA2RUH7 354 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 CREB3O43889 395 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 DNAJC8O75937 253 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 FYNP06241 537 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 MATKP42679 507 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 CPT1AP50416 773 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 FKBP1BP68106 108 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 TRIM32Q13049 653 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 KLHL38Q2WGJ6 581 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 SLC45A4Q5BKX6 768 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 SH2D5Q6ZV89 423 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 APBB1IPQ7Z5R6 666 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-213ENST00000472155 SLC44A1Q8WWI5 657 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 ZNF560Q96MR9 790 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 ZIC5Q96T25 663 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 PIGVQ9NUD9 493 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 IL1RAPL1Q9NZN1 696 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 ST3GAL5Q9UNP4 418 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 SNX10Q9Y5X0 201 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 MAD1L1Q9Y6D9 718 aa15.57■□□□□ 0.08
UBXN11-213ENST00000472155 CASTOR2A6NHX0 329 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 A8MUI8 341 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 EDF1O60869 148 aaKnown RBP15.56■□□□□ 0.08
UBXN11-213ENST00000472155 CSH1P0DML2 217 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 CSH2P0DML3 217 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 AXLP30530 894 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 ELF3P78545 371 aaPredicted RBP15.56■□□□□ 0.08
UBXN11-213ENST00000472155 SV2CQ496J9 727 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 GDF6Q6KF10 455 aaPredicted RBP15.56■□□□□ 0.08
UBXN11-213ENST00000472155 UNC5AQ6ZN44 842 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 RASAL3Q86YV0 1011 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 DUSP16Q9BY84 665 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 FAM124BQ9H5Z6 455 aaPredicted RBP15.56■□□□□ 0.08
UBXN11-213ENST00000472155 NMRK2Q9NPI5 230 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 ARHGEF4Q9NR80 690 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 FZD10Q9ULW2 581 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 CHKBQ9Y259 395 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 SMYD5Q6GMV2 418 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms