RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 STK38Q15208 465 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 ZNF667Q5HYK9 610 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 EMC10Q5UCC4 262 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 SCARA3Q6AZY7 606 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 CNNM4Q6P4Q7 775 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 SFTPA1Q8IWL2 248 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 NAT16Q8N8M0 369 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 IQUBQ8NA54 791 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 ZNF507Q8TCN5 953 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
CPSF4-211ENST00000471455 HSPA12BQ96MM6 686 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 BBS2Q9BXC9 721 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 B3GNT5Q9BYG0 378 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 PANK2Q9BZ23 570 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 TRIM9Q9C026 710 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 DPEP3Q9H4B8 488 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 VRTNQ9H8Y1 702 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
CPSF4-211ENST00000471455 KBTBD4Q9NVX7 518 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 MARK1Q9P0L2 795 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 GMIPQ9P107 970 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 RALYQ9UKM9 306 aaKnown RBP9.64□□□□□ -0.87
CPSF4-211ENST00000471455 ANKRD11Q6UB99 2663 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-211ENST00000471455 IGHV1OR15-9A0A0B4J2B8 117 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 FAM92AA1XBS5 289 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 FAM221BA6H8Z2 402 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 MEI4A8MW99 385 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 NEDD8-MDP1E9PL57 170 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 CLDN5O00501 218 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 EXOC3O60645 756 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 ZIC2O95409 532 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 TOP3BO95985 862 aaKnown RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 CST3P01034 146 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 ZDHHC11BP0C7U3 371 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 IRF1P10914 325 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 ZNF132P52740 706 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 MYL6P60660 151 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 MESP2Q0VG99 397 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 COL9A2Q14055 689 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 HTR3DQ70Z44 454 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 EPM2AIP1Q7L775 607 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 TMEM25Q86YD3 366 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 C12orf56Q8IXR9 622 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 RGL4Q8IZJ4 473 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 FRMD1Q8N878 549 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 TRIML1Q8N9V2 468 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 UCMAQ8WVF2 138 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 TAF4BQ92750 862 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 ZNF775Q96BV0 537 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 USP28Q96RU2 1077 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 CDK5RAP1Q96SZ6 601 aaKnown RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 GABRG3Q99928 467 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 XYLT2Q9H1B5 865 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 CCSER2Q9H7U1 834 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 ZDHHC4Q9NPG8 344 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 IL37Q9NZH6 218 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 CHORDC1Q9UHD1 332 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-211ENST00000471455 KLK13Q9UKR3 277 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 CYP8B1Q9UNU6 501 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 MYOFQ9NZM1 2061 aa9.63□□□□□ -0.87
CPSF4-211ENST00000471455 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 A0A087X0B3 334 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 A0A1W2PQF6 199 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 ANTXRLA6NF34 631 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 CLIC2O15247 247 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 SPTLC2O15270 562 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 TGFB1I1O43294 461 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 RPN1P04843 607 aaKnown RBP9.62□□□□□ -0.87
CPSF4-211ENST00000471455 FAM200BP0CF97 657 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 TYRP14679 529 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 SYT1P21579 422 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 ATP5C1P36542 298 aaKnown RBP9.62□□□□□ -0.87
CPSF4-211ENST00000471455 NASPP49321 788 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-211ENST00000471455 DGKGP49619 791 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 NCOA4Q13772 614 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 BMT2Q1RMZ1 405 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 EGFLAMQ63HQ2 1017 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 IL27RAQ6UWB1 636 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 LRSAM1Q6UWE0 723 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 KIAA1324Q6UXG2 1013 aaKnown RBP9.62□□□□□ -0.87
CPSF4-211ENST00000471455 UNC13DQ70J99 1090 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 RAB44Q7Z6P3 723 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-211ENST00000471455 UNC93AQ86WB7 457 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 NAXDQ8IW45 347 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 NELFCDQ8IXH7 590 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 GLIS3Q8NEA6 775 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 SCAMP5Q8TAC9 235 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 HPS3Q969F9 1004 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 DHX58Q96C10 678 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 KCTD15Q96SI1 283 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-211ENST00000471455 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 C7orf25Q9BPX7 421 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 SMYD3Q9H7B4 428 aa9.62□□□□□ -0.87
CPSF4-211ENST00000471455 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms