RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CCDC97Q96F63 343 aaPredicted RBP6.25□□□□□ -1.41
VARS-222ENST00000470953 ZCWPW1Q9H0M4 648 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 ADNPQ9H2P0 1102 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 TMEM206Q9H813 350 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 C17orf75Q9HAS0 396 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 CBX8Q9HC52 389 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 PTPRHQ9HD43 1115 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 ZNF71Q9NQZ8 489 aaPredicted RBP6.25□□□□□ -1.41
VARS-222ENST00000470953 STK17AQ9UEE5 414 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 VPS4AQ9UN37 437 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 ANKRD6Q9Y2G4 727 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 NFE2L3Q9Y4A8 694 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 RBM19Q9Y4C8 960 aaKnown RBP6.25□□□□□ -1.41
VARS-222ENST00000470953 CLIC4Q9Y696 253 aa6.25□□□□□ -1.41
VARS-222ENST00000470953 TRAV19A0A0A6YYK7 116 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 PMS2P1A4D2B8 440 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 HNRNPDLO14979 420 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 PAPSS1O43252 624 aaPredicted RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 NTSR1P30989 418 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 ABCD1P33897 745 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 EIF2DP41214 584 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 BECN1Q14457 450 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 MCM6Q14566 821 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
VARS-222ENST00000470953 SHBQ15464 509 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 HYIQ5T013 277 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 C10orf76Q5T2E6 689 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 RRAGBQ5VZM2 374 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 ARMCX5Q6P1M9 558 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 FAM173BQ6P4H8 233 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 DSTYKQ6XUX3 929 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 CCDC73Q6ZRK6 1079 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 RSRC2Q7L4I2 434 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 TAOK1Q7L7X3 1001 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 KANSL1Q7Z3B3 1105 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 KCNK18Q7Z418 384 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 ETFBKMTQ8IXQ9 262 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 EID2Q8N6I1 236 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 SYT2Q8N9I0 419 aaPredicted RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 CADM4Q8NFZ8 388 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 RAD54LQ92698 747 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 IGSF8Q969P0 613 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 SENP8Q96LD8 212 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 REEP2Q9BRK0 252 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 MMTAG2Q9BU76 263 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 TARS2Q9BW92 718 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 OXCT2Q9BYC2 517 aaPredicted RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 MKRN2Q9H000 416 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 PARVGQ9HBI0 331 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 ABI2Q9NYB9 513 aaPredicted RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 USP36Q9P275 1121 aaKnown RBP6.24□□□□□ -1.41
VARS-222ENST00000470953 ADAMTS1Q9UHI8 967 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 ODF2LQ9ULJ1 636 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 ARHGAP26Q9UNA1 814 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 SATB2Q9UPW6 733 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 MTMR6Q9Y217 621 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 TNFSF13BQ9Y275 285 aa6.24□□□□□ -1.41
VARS-222ENST00000470953 CUBNO60494 3623 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 NPHP3-ACAD11A0A0J9YXS1 232 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 SFI1A8K8P3 1242 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 SPTLC2O15270 562 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 LDLRP01130 860 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ADH5P11766 374 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 IDEP14735 1019 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TCF3P15923 654 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 HDCP19113 662 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 WT1P19544 449 aaPredicted RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 TYMPP19971 482 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 LRPAP1P30533 357 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 GRIK1P39086 918 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 CTSKP43235 329 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ME1P48163 572 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 DUSP3P51452 185 aaPredicted RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 SLC12A3P55017 1021 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ILKQ13418 452 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TGIF1Q15583 401 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 C3orf38Q5JPI3 329 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 LY6G5CQ5SRR4 150 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 IGF2-ASQ6U949 168 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 MPZL3Q6UWV2 235 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 C1orf186Q6ZWK4 172 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 SV2AQ7L0J3 742 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 SV2BQ7L1I2 683 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TAS1R3Q7RTX0 852 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TIPARPQ7Z3E1 657 aaKnown RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 CHPFQ8IZ52 775 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 NOC3LQ8WTT2 800 aaKnown RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 SNX19Q92543 992 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TCTN2Q96GX1 697 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 PRR11Q96HE9 360 aaPredicted RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 ZBTB45Q96K62 511 aaPredicted RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 SLC46A1Q96NT5 459 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 USP28Q96RU2 1077 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ACO2Q99798 780 aaKnown RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 GABRG3Q99928 467 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TRIM9Q9C026 710 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms