RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TJP3O95049 919 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 SLU7O95391 586 aaKnown RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 FGGP02679 453 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 FYNP06241 537 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 RARAP10276 462 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 PYGMP11217 842 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 MYL4P12829 197 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 HMGA1P17096 107 aaKnown RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 PTPN2P17706 415 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 MARCKSL1P49006 195 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 TUBP50607 506 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 CDH6P55285 790 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 TBX4P57082 545 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 COG7P83436 770 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 SLC25A11Q02978 314 aaKnown RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 NNTQ13423 1086 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 CAMK1Q14012 370 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 DUSP6Q16828 381 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 TFDP3Q5H9I0 405 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 PPP6R3Q5H9R7 873 aaPredicted RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 KCNT1Q5JUK3 1230 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 ACBD5Q5T8D3 534 aaPredicted RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 MSANTD2Q6P1R3 559 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 PDZD4Q76G19 769 aaPredicted RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 MIB1Q86YT6 1006 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 UNC45BQ8IWX7 931 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 RNF25Q96BH1 459 aaPredicted RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 CORO1BQ9BR76 489 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 ATXN3LQ9H3M9 355 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 DHX35Q9H5Z1 703 aaKnown RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 ZNF576Q9H609 170 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 L2HGDHQ9H9P8 463 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 NMUR1Q9HB89 426 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 PIGVQ9NUD9 493 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 DZANK1Q9NVP4 752 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 KLHL11Q9NVR0 708 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCM2-204ENST00000470837 STIM2Q9P246 746 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 SFMBT1Q9UHJ3 866 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 TTC7AQ9ULT0 858 aaPredicted RBP10.15□□□□□ -0.78
CCM2-204ENST00000470837 AP4E1Q9UPM8 1137 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 TLR6Q9Y2C9 796 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 HCFC2Q9Y5Z7 792 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 VWA8A3KMH1 1905 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 PTPRSQ13332 1948 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 TMEM265A0A087WTH1 108 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 PI4K2BG5E9Z4 385 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 H3BRJ5 948 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ZNF197O14709 1029 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 FANCGO15287 622 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 IRAK2O43187 625 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ZDHHC11BP0C7U3 371 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 EPCAMP16422 314 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ZFXP17010 805 aaPredicted RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 TFE3P19532 575 aaPredicted RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 KDELR1P24390 212 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 IL1R2P27930 398 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 GABRR2P28476 465 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ADRA1BP35368 520 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 HARS2P49590 506 aaKnown RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 CXCR3P49682 368 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ZNF135P52742 658 aaPredicted RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 TFDP2Q14188 446 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 PPP2R5DQ14738 602 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 TRIP4Q15650 581 aaPredicted RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 PPP2R5EQ16537 467 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 LRIT3Q3SXY7 679 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 SNX30Q5VWJ9 437 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 KAZNQ674X7 775 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 NUGGCQ68CJ6 796 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 KLHDC10Q6PID8 442 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 SPOCD1Q6ZMY3 1216 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 CPNE8Q86YQ8 564 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 RFX6Q8HWS3 928 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 CREG2Q8IUH2 290 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ZNF276Q8N554 614 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ARFGAP1Q8N6T3 406 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 CMASQ8NFW8 434 aaPredicted RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 SLC22A17Q8WUG5 538 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 NTAN1Q96AB6 310 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 MS4A14Q96JA4 679 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 EPAS1Q99814 870 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 SNRNP25Q9BV90 132 aaKnown RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 CARD6Q9BX69 1037 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 OSBPL8Q9BZF1 889 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 TKTL2Q9H0I9 626 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 SLITRK6Q9H5Y7 841 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 NSUN3Q9H649 340 aaKnown RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 IGFLR1Q9H665 355 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 SFXN1Q9H9B4 322 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 HOMER3Q9NSC5 361 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 OSER1Q9NX31 292 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 NUDT5Q9UKK9 219 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 FZD10Q9ULW2 581 aa10.14□□□□□ -0.79
CCM2-204ENST00000470837 HBS1LQ9Y450 684 aaKnown RBP10.14□□□□□ -0.79
CCM2-204ENST00000470837 TRAV19A0A0A6YYK7 116 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 CCDC195A0A1B0GUA6 201 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 CCDC188H7C350 402 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 RIOK3O14730 519 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms