RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 RSRC2Q7L4I2 434 aaKnown RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 DNAJB7Q7Z6W7 309 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 TADA2BQ86TJ2 420 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 FAM131BQ86XD5 332 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SLC13A5Q86YT5 568 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 MAP7D3Q8IWC1 876 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 KCTD6Q8NC69 237 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 MAIP1Q8WWC4 291 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ARNTL2Q8WYA1 636 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 TIFAQ96CG3 184 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SERPINB11Q96P15 392 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SNRNP25Q9BV90 132 aaKnown RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 OSBPL8Q9BZF1 889 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SMARCAL1Q9NZC9 954 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 TRPM5Q9NZQ8 1165 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 DPP7Q9UHL4 492 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 FZD10Q9ULW2 581 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 MAGED2Q9UNF1 606 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 EFR3BQ9Y2G0 817 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 hCG_1818297A0A087WSY0 165 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 EPOPA6NHQ4 379 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 TLR5O60602 858 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 TADA3O75528 432 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ZMYND10O75800 440 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PAPLNO95428 1278 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 HNRNPA1P09651 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 SPATA31D3P0C874 917 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 SLC2A3P11169 496 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ADRA1BP35368 520 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 CDKN2BP42772 138 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 KPNA1P52294 538 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF135P52742 658 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 NME3Q13232 169 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PPP2R5DQ14738 602 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ARL13BQ3SXY8 428 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PABPC1LQ4VXU2 614 aaKnown RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 TFDP3Q5H9I0 405 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 BRMS1LQ5PSV4 323 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PPM1LQ5SGD2 360 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 C10orf120Q5SQS8 335 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 HECTD3Q5T447 861 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ZFYVE27Q5T4F4 411 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 AADACL2Q6P093 401 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 MFSD7Q6UXD7 560 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 SPATA31D4Q6ZUB0 917 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ELMOD1Q8N336 334 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 CCDC185Q8N715 623 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 SPATA4Q8NEY3 305 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 MYRIPQ8NFW9 859 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 GDPD5Q8WTR4 605 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 TSC1Q92574 1164 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 HSPH1Q92598 858 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 CASP10Q92851 521 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 FAF2Q96CS3 445 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 SLC39A13Q96H72 371 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF512Q96ME7 567 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 CDCA3Q99618 268 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF670Q9BS34 389 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 LRRC3Q9BY71 257 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PRDM16Q9HAZ2 1276 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 IL21Q9HBE4 155 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PCDH18Q9HCL0 1135 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 MAN1C1Q9NR34 630 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 KLHL11Q9NVR0 708 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 MTMR10Q9NXD2 777 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ZDHHC7Q9NXF8 308 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 ARHGEF38Q9NXL2 777 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 MARCH2Q9P0N8 246 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 RCOR3Q9P2K3 495 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-233ENST00000470710 AP4E1Q9UPM8 1137 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 TLR6Q9Y2C9 796 aa9.05□□□□□ -0.96
HDLBP-233ENST00000470710 PLXNA3P51805 1871 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 MYO7AQ13402 2215 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 SYNJ2BP-COX16A0A087WUM0 186 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 GOLGA6L10A0A0M3HER8 536 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 A0A1W2PPC1 479 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 EFCAB8A8MWE9 144 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 KCNU1A8MYU2 1149 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 PI4K2BG5E9Z4 385 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CCDC188H7C350 402 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 KRIT1O00522 736 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TJP3O95049 919 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CSPG5O95196 566 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 FGF19O95750 216 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 OAS1P00973 400 aaKnown RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 F11P03951 625 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 EPCAMP16422 314 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 PFKLP17858 780 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CDC25CP30307 473 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 L1CAMP32004 1257 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms