RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 JRKLQ9Y4A0 524 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 INSL6Q9Y581 213 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 PCDHB12Q9Y5F1 795 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 PCDHGC5Q9Y5F6 944 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 PATJQ8NI35 1801 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 DCHS1Q96JQ0 3298 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 TECTAO75443 2155 aa6.98□□□□□ -1.29
VAMP3-202ENST00000470357 A0A0A0MRY4 1105 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 C1QTNF9BB2RNN3 333 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 XPO1O14980 1071 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 SART1O43290 800 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 FAM200BP0CF97 657 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 CES1P23141 567 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 LMO2P25791 158 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 GPD2P43304 727 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 BRCC3P46736 316 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 GABRB2P47870 512 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 SLC11A1P49279 550 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 CREMQ03060 361 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 KRT17Q04695 432 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 ZP2Q05996 745 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 ZNF268Q14587 947 aaPredicted RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 USP41Q3LFD5 358 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PAN2Q504Q3 1202 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 FAM171A1Q5VUB5 890 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PLEKHA7Q6IQ23 1121 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 C11orf63Q6NUN7 778 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 DENND1BQ6P3S1 775 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 DNAJC24Q6P3W2 148 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 FAM171BQ6P995 826 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 KCNT2Q6UVM3 1135 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 CD300LGQ6UXG3 332 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 OSTM1Q86WC4 334 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PALB2Q86YC2 1186 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PASD1Q8IV76 773 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 FIBCD1Q8N539 461 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 C3orf20Q8ND61 904 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 C1orf131Q8NDD1 294 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PRSS33Q8NF86 280 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 SLC35G2Q8TBE7 412 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 SMARCD1Q96GM5 515 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 FUBP3Q96I24 572 aaKnown RBP eCLIP6.97□□□□□ -1.291e-14■□□□□ 10.6
VAMP3-202ENST00000470357 TGS1Q96RS0 853 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 RAD9AQ99638 391 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 NAPGQ99747 312 aaPredicted RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 C11orf70Q9BRQ4 267 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 MED10Q9BTT4 135 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 TTPALQ9BTX7 342 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 TRIM62Q9BVG3 475 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PACSIN1Q9BY11 444 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 DUSP16Q9BY84 665 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 UBXN6Q9BZV1 441 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 THAP2Q9H0W7 228 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 RC3H2Q9HBD1 1191 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 PNPLA8Q9NP80 782 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 TMEM51Q9NW97 253 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 TAS2R14Q9NYV8 317 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 CNOT8Q9UFF9 292 aaKnown RBP6.97□□□□□ -1.29
VAMP3-202ENST00000470357 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 MTUS1Q9ULD2 1270 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 SSX2IPQ9Y2D8 614 aa6.97□□□□□ -1.29
VAMP3-202ENST00000470357 DNAH14Q0VDD8 3507 aa6.96□□□□□ -1.29
VAMP3-202ENST00000470357 MIF4GDA9UHW6 222 aaKnown RBP6.96□□□□□ -1.3
VAMP3-202ENST00000470357 H3BQ06 376 aaPredicted RBP6.96□□□□□ -1.3
VAMP3-202ENST00000470357 I3L4J1 428 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 MYO1FO00160 1098 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 B4GALT3O60512 393 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 FBXO21O94952 628 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 MOCS3O95396 460 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 ITGB1P05556 798 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 TCP1P17987 556 aaKnown RBP6.96□□□□□ -1.3
VAMP3-202ENST00000470357 LTBRP36941 435 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 SLC1A1P43005 524 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 RPL34P49207 117 aaKnown RBP6.96□□□□□ -1.3
VAMP3-202ENST00000470357 GATMP50440 423 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 ATP11AP98196 1134 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 PDCLQ13371 301 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 ORC1Q13415 861 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 ACAP1Q15027 740 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 CLUL1Q15846 466 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 CFAP221Q4G0U5 840 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 CTXN3Q4LDR2 81 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 MDH1BQ5I0G3 518 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 KIAA1841Q6NSI8 718 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 DCUN1D2Q6PH85 259 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 VSTM1Q6UX27 236 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 SYT10Q6XYQ8 523 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 MMS22LQ6ZRQ5 1243 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 DAAM2Q86T65 1068 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 TMEM110Q86TL2 294 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 DDX53Q86TM3 631 aaKnown RBP6.96□□□□□ -1.3
VAMP3-202ENST00000470357 CD163Q86VB7 1156 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 WFDC8Q8IUA0 241 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 SPATA2LQ8IUW3 424 aaPredicted RBP6.96□□□□□ -1.3
VAMP3-202ENST00000470357 FUKQ8N0W3 1084 aa6.96□□□□□ -1.3
VAMP3-202ENST00000470357 SLC35F6Q8N357 371 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms