RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 ACSF2Q96CM8 615 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-209ENST00000469852 ZNF830Q96NB3 372 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-209ENST00000469852 TBCBQ99426 244 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
COL9A3-209ENST00000469852 NACA2Q9H009 215 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 SMOC2Q9H3U7 446 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 TRPV4Q9HBA0 871 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 TDP1Q9NUW8 608 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL9A3-209ENST00000469852 MARCH2Q9P0N8 246 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 LIMD1Q9UGP4 676 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 DNMT3LQ9UJW3 386 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 ARHGAP26Q9UNA1 814 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 NR2E1Q9Y466 385 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 ZFP37Q9Y6Q3 630 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-209ENST00000469852 NUMBLQ9Y6R0 609 aa15.44■□□□□ 0.06
COL9A3-209ENST00000469852 SLC12A8A0AV02 714 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ANHXE9PGG2 379 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 LEFTY2O00292 366 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 GREM1O60565 184 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 IGLV3-25P01717 112 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ASGR2P07307 311 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 H2AFZP0C0S5 128 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 TMEM253P0C7T8 217 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 MYBL1P10243 752 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 NOS2P35228 1153 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ATXN1P54253 815 aaKnown RBP15.43■□□□□ 0.06
COL9A3-209ENST00000469852 GPC5P78333 572 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ZNF252P-AS1Q0IIN9 211 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 USP4Q13107 963 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 EIF4EBP2Q13542 120 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ZNF77Q15935 545 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 C15orf59Q2T9L4 293 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-209ENST00000469852 CCDC14Q49A88 953 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 SH3PXD2AQ5TCZ1 1133 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 VITQ6UXI7 678 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 H2AFVQ71UI9 128 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ZDHHC14Q8IZN3 488 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 SH3RF2Q8TEC5 729 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 NT5C3BQ969T7 300 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 TRIM11Q96F44 468 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 PPP1R9BQ96SB3 815 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 CDK5RAP1Q96SZ6 601 aaKnown RBP15.43■□□□□ 0.06
COL9A3-209ENST00000469852 NPY6RQ99463 290 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 OLA1Q9NTK5 396 aaKnown RBP15.43■□□□□ 0.06
COL9A3-209ENST00000469852 PARVAQ9NVD7 372 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 ZMYM5Q9UJ78 669 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 PCDHA13Q9Y5I0 950 aa15.43■□□□□ 0.06
COL9A3-209ENST00000469852 MYO10Q9HD67 2058 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 SYNJ2BP-COX16A0A087WUM0 186 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 TMEM191CA6NGB0 347 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 C19orf67A6NJJ6 358 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 HEPACAM2A8MVW5 462 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 IRAK2O43187 625 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 STC2O76061 302 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 TRUB2O95900 331 aaKnown RBP15.42■□□□□ 0.06
COL9A3-209ENST00000469852 PDGFRAP16234 1089 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 PLA2G5P39877 138 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 MAGEA1P43355 309 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 SULT1E1P49888 294 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 GRM2Q14416 872 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 ARCQ7LC44 396 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 BNIPLQ7Z465 357 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 TADA2BQ86TJ2 420 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 CELF5Q8N6W0 485 aaKnown RBP15.42■□□□□ 0.06
COL9A3-209ENST00000469852 CTNNBL1Q8WYA6 563 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-209ENST00000469852 BTBD6Q96KE9 485 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 NUP85Q9BW27 656 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 CD320Q9NPF0 282 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 OSGEPQ9NPF4 335 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 COX16Q9P0S2 106 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 CFAP97Q9P2B7 532 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 PRKAG3Q9UGI9 489 aa15.42■□□□□ 0.06
COL9A3-209ENST00000469852 CCP110O43303 1012 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 IGLV3-27P01718 113 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 KLKB1P03952 638 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 PTMAP06454 111 aaKnown RBP15.41■□□□□ 0.06
COL9A3-209ENST00000469852 GPD1P21695 349 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 ATP11AP98196 1134 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 CCDC173Q0VFZ6 552 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 SPA17Q15506 151 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 TRIP4Q15650 581 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-209ENST00000469852 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 CPNE8Q86YQ8 564 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 PLCD3Q8N3E9 789 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 CCDC112Q8NEF3 446 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 ELSPBP1Q96BH3 223 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 ASIC4Q96FT7 647 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 FCRL2Q96LA5 508 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-209ENST00000469852 LRFN3Q9BTN0 628 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 TRIM62Q9BVG3 475 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 FAM204AQ9H8W3 233 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 KCNK12Q9HB15 430 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 ZFP14Q9HCL3 533 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 PIGVQ9NUD9 493 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 DDIT4Q9NX09 232 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 SCINQ9Y6U3 715 aa15.41■□□□□ 0.06
COL9A3-209ENST00000469852 M0QYT0 321 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms