RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 NUDT18Q6ZVK8 323 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 TCEAL3Q969E4 200 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 ULBP1Q9BZM6 244 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 MARCH2Q9P0N8 246 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 ZNF510Q9Y2H8 683 aa17.1■□□□□ 0.33
COL9A3-208ENST00000469802 P4HA2O15460 535 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 PAEPP09466 180 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 SETSIPP0DME0 302 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 VDRP11473 427 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 HOXB2P14652 356 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 CD19P15391 556 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 NTSR1P30989 418 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 CORO1AP31146 461 aaKnown RBP17.09■□□□□ 0.33
COL9A3-208ENST00000469802 DGKGP49619 791 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 LRMPQ12912 555 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 CCDC40Q4G0X9 1142 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 FAM217AQ8IXS0 508 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 SCML4Q8N228 414 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 KCTD13Q8WZ19 329 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 TFAP2BQ92481 460 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 NT5C1BQ96P26 610 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 ACOX2Q99424 681 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 GABRG3Q99928 467 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 DCLK3Q9C098 648 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 AGO1Q9UL18 857 aaKnown RBP17.09■□□□□ 0.33
COL9A3-208ENST00000469802 KIAA1257Q9ULG3 409 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 SLC27A6Q9Y2P4 619 aa17.09■□□□□ 0.33
COL9A3-208ENST00000469802 PCDH15Q96QU1 1955 aa17.08■□□□□ 0.33
COL9A3-208ENST00000469802 BICDL2A1A5D9 508 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 CAVIN2O95810 425 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 GABRG2P18507 467 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 MARSP56192 900 aaKnown RBP17.08■□□□□ 0.32
COL9A3-208ENST00000469802 ADIGQ0VDE8 80 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 PPM1JQ5JR12 505 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 STPG1Q5TH74 334 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 TMEM270Q6UE05 265 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 RSRC2Q7L4I2 434 aaKnown RBP17.08■□□□□ 0.32
COL9A3-208ENST00000469802 TRIM59Q8IWR1 403 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 CPXM2Q8N436 756 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 FRMD1Q8N878 549 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 RLN3Q8WXF3 142 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 NDRG1Q92597 394 aaKnown RBP17.08■□□□□ 0.32
COL9A3-208ENST00000469802 KAT5Q92993 513 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 PLD4Q96BZ4 506 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 SPACA7Q96KW9 195 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 PLK2Q9NYY3 685 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 BCCIPQ9P287 314 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL9A3-208ENST00000469802 MBD1Q9UIS9 605 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-208ENST00000469802 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-208ENST00000469802 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
COL9A3-208ENST00000469802 LNP1A1A4G5 178 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 GABBR2O75899 941 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 ADRB1P08588 477 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 CHKAP35790 457 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 ZNF132P52740 706 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 GCNT1Q02742 428 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 TRIP4Q15650 581 aaPredicted RBP17.07■□□□□ 0.32
COL9A3-208ENST00000469802 CYP2U1Q7Z449 544 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 UBA3Q8TBC4 463 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 DDX1Q92499 740 aaKnown RBP17.07■□□□□ 0.32
COL9A3-208ENST00000469802 BHMTQ93088 406 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 LRRC4Q9HBW1 653 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 OLA1Q9NTK5 396 aaKnown RBP17.07■□□□□ 0.32
COL9A3-208ENST00000469802 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 STRIP2Q9ULQ0 834 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL9A3-208ENST00000469802 ADAMTS9Q9P2N4 1935 aa17.07■□□□□ 0.32
COL9A3-208ENST00000469802 SLC12A8A0AV02 714 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 YJEFN3A6XGL0 299 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 E7ENQ6 273 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
COL9A3-208ENST00000469802 GFRA2O00451 464 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 BIN1O00499 593 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 HMBSP08397 361 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 WASP42768 502 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 MFAP3P55082 362 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 DAOAP59103 153 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 PAK1Q13153 545 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 SPDYCQ5MJ68 293 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 IL31Q6EBC2 164 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 KIAA1211LQ6NV74 962 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 DENND1CQ8IV53 801 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 CHPFQ8IZ52 775 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 PPM1KQ8N3J5 372 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 SLC35F5Q8WV83 523 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
COL9A3-208ENST00000469802 EDEM2Q9BV94 578 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 CNGB3Q9NQW8 809 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 STOML2Q9UJZ1 356 aa17.06■□□□□ 0.32
COL9A3-208ENST00000469802 HBS1LQ9Y450 684 aaKnown RBP17.06■□□□□ 0.32
COL9A3-208ENST00000469802 NYNRINQ9P2P1 1898 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms