RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ASPRV1Q53RT3 343 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CAVIN4Q5BKX8 364 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 AARS2Q5JTZ9 985 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 FAAH2Q6GMR7 532 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 PLEKHA7Q6IQ23 1121 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 BNC2Q6ZN30 1099 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 FRMD7Q6ZUT3 714 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT27Q7Z3Y8 459 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 MCOLN2Q8IZK6 566 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 RNF169Q8NCN4 708 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 MED30Q96HR3 178 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 TMEM79Q9BSE2 394 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 MECRQ9BV79 373 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CEP44Q9C0F1 390 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 KLHL25Q9H0H3 589 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 SNED1Q8TER0 1413 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 FAM170AA1A519 330 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 ERVV-1B6SEH8 477 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 TRIM49D1C9J1S8 452 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 BCAS2O75934 225 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 STARD3NLO95772 234 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CHEK2O96017 543 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 S100BP04271 92 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 ZSCAN5DPP0CG00 497 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CHRNB1P11230 501 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 GYS1P13807 737 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CRHR1P34998 444 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 KPNA1P52294 538 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 TUBA1BP68363 451 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 SPIRE1Q08AE8 756 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 KCNA1Q09470 495 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 IKBKEQ14164 716 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 PPP2R5DQ14738 602 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF846Q147U1 533 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 DGKDQ16760 1214 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 MGAT5BQ3V5L5 792 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 FNBP1LQ5T0N5 605 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 IRAK1BP1Q5VVH5 260 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CES4AQ5XG92 561 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 PPP2R2DQ66LE6 453 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 XKR5Q6UX68 686 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 AGMOQ6ZNB7 445 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 LINC00299Q6ZSB3 139 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 TUBA1AQ71U36 451 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC47A2Q86VL8 602 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 ELMOD1Q8N336 334 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC15A4Q8N697 577 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 UBR7Q8N806 425 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 PDCD6IPQ8WUM4 868 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 HPS1Q92902 700 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 ATP2A3Q93084 1043 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 RMDN3Q96TC7 470 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 FAM118BQ9BPY3 351 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 WDR83Q9BRX9 315 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 WDR12Q9GZL7 423 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 TMEM117Q9H0C3 514 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 MAGEE1Q9HCI5 957 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 IPO11Q9UI26 975 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CDC14AQ9UNH5 594 aa9.3□□□□□ -0.92
SMARCE1-207ENST00000469334 CCDC195A0A1B0GUA6 201 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 M0QX08 132 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 DYNC1LI2O43237 492 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 BANF1O75531 89 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 SPATA31C1P0DKV0 1188 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT5P13647 590 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 TCEA1P23193 301 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 GABRB3P28472 473 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 VAMP7P51809 220 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 TMBIM6P55061 237 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PEX3P56589 373 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MRPS5P82675 430 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CTBSQ01459 385 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT76Q01546 638 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ITGADQ13349 1161 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PIGGQ5H8A4 983 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 LIN9Q5TKA1 542 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PLA2G4FQ68DD2 849 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PPP4R4Q6NUP7 873 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CDHR3Q6ZTQ4 885 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 IGFN1Q86VF2 1251 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF677Q86XU0 584 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CADM3Q8N126 398 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 THEMISQ8N1K5 641 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 TTC30BQ8N4P2 665 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 DDX1Q92499 740 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CPT1BQ92523 772 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms