RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PM20D1Q6GTS8 502 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
SMC1A-205ENST00000469129 GPRIN1Q7Z2K8 1008 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 FAM131BQ86XD5 332 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 PPIL6Q8IXY8 311 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 ARFGAP2Q8N6H7 521 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 CCDC185Q8N715 623 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 PLD5Q8N7P1 536 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 SLC7A14Q8TBB6 771 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 SPPL2BQ8TCT7 592 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 RTP4Q96DX8 246 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 ATP6V1G3Q96LB4 118 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 C8orf48Q96LL4 319 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
SMC1A-205ENST00000469129 KCNK16Q96T55 309 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 TMEM121Q9BTD3 319 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 FRMD8Q9BZ67 464 aaPredicted RBP9.7□□□□□ -0.86
SMC1A-205ENST00000469129 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 FBXO44Q9H4M3 255 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 ABCC13Q9NSE7 274 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 PAK5Q9P286 719 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 RAD54BQ9Y620 910 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 USP3Q9Y6I4 520 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 COL4A6Q14031 1691 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 DOCK4Q8N1I0 1966 aa9.7□□□□□ -0.86
SMC1A-205ENST00000469129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 BCLAF3A2AJT9 711 aaKnown RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TBKBP1A7MCY6 615 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 H0YGN5 161 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 EEF2KO00418 725 aaKnown RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 EIF3HO15372 352 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RIPK2O43353 540 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 OBSL1O75147 1896 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 STK10O94804 968 aaKnown RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CLTBP09497 229 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CPB1P15086 417 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TFE3P19532 575 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 FGFR3P22607 806 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 HTR7P34969 479 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 SLC11A1P49279 550 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 SLC5A3P53794 718 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CACNA2D1P54289 1103 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 YWHAGP61981 247 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TLE2Q04725 743 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ZNF844Q08AG5 666 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 FAAP100Q0VG06 881 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 NME3Q13232 169 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 IKBKEQ14164 716 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 GPNMBQ14956 572 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CA9Q16790 459 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RAB6CQ53S08 254 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RNASEH2BQ5TBB1 312 aaKnown RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 FAM171A1Q5VUB5 890 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 BTBD8Q5XKL5 378 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 FUT10Q6P4F1 479 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 C1orf228Q6PIY5 440 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 HFE2Q6ZVN8 426 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ANKS3Q6ZW76 656 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CENPUQ71F23 418 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 PQLC3Q8N755 202 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 PCDH19Q8TAB3 1148 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RNF139Q8WU17 664 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 SCLYQ96I15 445 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 QKIQ96PU8 341 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CSPG4P5Q96PW8 444 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TMEM209Q96SK2 561 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 EPAS1Q99814 870 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CCDC77Q9BR77 488 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TMEM109Q9BVC6 243 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RHOBTB2Q9BYZ6 727 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ROPN1BQ9BZX4 212 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 RAB6CQ9H0N0 254 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 CDC42EP4Q9H3Q1 356 aaKnown RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ROPN1Q9HAT0 212 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TMBIM4Q9HC24 238 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 PIGVQ9NUD9 493 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TMEM30AQ9NV96 361 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TMLHEQ9NVH6 421 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 COMMD8Q9NX08 183 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 DDIT4Q9NX09 232 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 MARCH5Q9NX47 278 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ABI2Q9NYB9 513 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-205ENST00000469129 PSD3Q9NYI0 1048 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 TBX21Q9UL17 535 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 NAALADL1Q9UQQ1 740 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 ATP11BQ9Y2G3 1177 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 NFS1Q9Y697 457 aa9.69□□□□□ -0.86
SMC1A-205ENST00000469129 PLXNA4Q9HCM2 1894 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SYNJ2BP-COX16A0A087WUM0 186 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 F8W810 466 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 PPP1R12AO14974 1030 aaPredicted RBP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 CHADO15335 359 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 NCAM2O15394 837 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 RTN3O95197 1032 aaPredicted RBP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 ABHD2P08910 425 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 IL4RP24394 825 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms