RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CORO1AP31146 461 aaKnown RBP19.98■□□□□ 0.79
COL7A1-207ENST00000467985 DGKGP49619 791 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 TMEM92Q6UXU6 159 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 RRAGAQ7L523 313 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 BHLHA9Q7RTU4 235 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 MLKLQ8NB16 471 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 RBBP8NLQ8NC74 664 aaPredicted RBP19.98■□□□□ 0.79
COL7A1-207ENST00000467985 MDGA1Q8NFP4 955 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 RNF139Q8WU17 664 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 TFAP2BQ92481 460 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 FAM81BQ96LP2 452 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 RTKNQ9BST9 563 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 INTS2Q9H0H0 1204 aaKnown RBP19.98■□□□□ 0.79
COL7A1-207ENST00000467985 ARRDC1-AS1Q9H2J1 176 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 ABCC13Q9NSE7 274 aa19.98■□□□□ 0.79
COL7A1-207ENST00000467985 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.98■□□□□ 0.79
COL7A1-207ENST00000467985 SLC12A8A0AV02 714 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 ANTXRLA6NF34 631 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 ADAM23O75077 832 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 CYBBP04839 570 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 HMBSP08397 361 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 ZNF806P0C7X5 589 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 GBP1P32455 592 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 ZNF132P52740 706 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 BYSLQ13895 437 aaKnown RBP19.97■□□□□ 0.79
COL7A1-207ENST00000467985 BSPRYQ5W0U4 402 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 SDE2Q6IQ49 451 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 ARHGEF19Q8IW93 802 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 SLC35F5Q8WV83 523 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 IRGQQ8WZA9 623 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 KAT5Q92993 513 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 TPSD1Q9BZJ3 242 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 BCCIPQ9P287 314 aaKnown RBP eCLIP19.97■□□□□ 0.79
COL7A1-207ENST00000467985 FBXO10Q9UK96 956 aa19.97■□□□□ 0.79
COL7A1-207ENST00000467985 AGO1Q9UL18 857 aaKnown RBP19.97■□□□□ 0.79
COL7A1-207ENST00000467985 HBS1LQ9Y450 684 aaKnown RBP19.97■□□□□ 0.79
COL7A1-207ENST00000467985 NCOR2Q9Y618 2525 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 YJEFN3A6XGL0 299 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 E7ENQ6 273 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 M0QYV0 167 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 RNF225M0QZC1 329 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-207ENST00000467985 TRIM24O15164 1050 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 PENKP01210 267 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-207ENST00000467985 NTSR1P30989 418 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 HARS2P49590 506 aaKnown RBP19.96■□□□□ 0.79
COL7A1-207ENST00000467985 E2F5Q15329 346 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 ENOSF1Q7L5Y1 443 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 DENND1CQ8IV53 801 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 CPXM2Q8N436 756 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 OLIG1Q8TAK6 271 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 SPACA7Q96KW9 195 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 HSFY1Q96LI6 401 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 VPS45Q9NRW7 570 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 CNTN6Q9UQ52 1028 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 SLC27A6Q9Y2P4 619 aa19.96■□□□□ 0.79
COL7A1-207ENST00000467985 MYO18AQ92614 2054 aaKnown RBP19.96■□□□□ 0.79
COL7A1-207ENST00000467985 TCRBV21S2A2A0A5A6 115 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 DCLK1O15075 740 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 ZBTB24O43167 697 aaPredicted RBP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 FBXO21O94952 628 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 CISD3P0C7P0 127 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 LCP1P13796 627 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 HNRNPLP14866 589 aaKnown RBP eCLIP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 BRD2P25440 801 aaKnown RBP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 MPLP40238 635 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 ATXN1P54253 815 aaKnown RBP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 DAOAP59103 153 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 TRIP4Q15650 581 aaPredicted RBP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 PLA2G2CQ5R387 149 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 PMF1Q6P1K2 205 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 FMNL3Q8IVF7 1028 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 C12orf50Q8NA57 414 aaPredicted RBP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 HMGB4Q8WW32 186 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 NDRG1Q92597 394 aaKnown RBP19.95■□□□□ 0.78
COL7A1-207ENST00000467985 GOLGA1Q92805 767 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 BHMTQ93088 406 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 PLK2Q9NYY3 685 aa19.95■□□□□ 0.78
COL7A1-207ENST00000467985 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-207ENST00000467985 LATS1O95835 1130 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 KRT5P13647 590 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 HOXB2P14652 356 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 MFAP3P55082 362 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 ZNF445P59923 1031 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 MEA1Q16626 185 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 FYB2Q5VWT5 728 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 PMS2CLQ68D20 193 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 SMYD5Q6GMV2 418 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 FAM217AQ8IXS0 508 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 CHPFQ8IZ52 775 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 PGBD3Q8N328 593 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 EDEM1Q92611 657 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 KREMEN1Q96MU8 473 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 ZSWIM1Q9BR11 485 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 SLC2A11Q9BYW1 496 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 CLSTN2Q9H4D0 955 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 UBE2TQ9NPD8 197 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-207ENST00000467985 ZDHHC4Q9NPG8 344 aa19.94■□□□□ 0.78
COL7A1-207ENST00000467985 GTPBP10A4D1E9 387 aaKnown RBP19.93■□□□□ 0.78
COL7A1-207ENST00000467985 PRRT4C9JH25 899 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 GFRA2O00451 464 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms