RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 HHIPQ96QV1 700 aa10.88□□□□□ -0.67
SSR3-205ENST00000467789 RTKNQ9BST9 563 aa10.88□□□□□ -0.67
SSR3-205ENST00000467789 POLMQ9NP87 494 aaPredicted RBP10.88□□□□□ -0.67
SSR3-205ENST00000467789 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
SSR3-205ENST00000467789 CDV3Q9UKY7 258 aaKnown RBP10.88□□□□□ -0.67
SSR3-205ENST00000467789 STRIP2Q9ULQ0 834 aa10.88□□□□□ -0.67
SSR3-205ENST00000467789 STARD13Q9Y3M8 1113 aa10.88□□□□□ -0.67
SSR3-205ENST00000467789 TBC1D3BA6NDS4 549 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 SCAMP3O14828 347 aaKnown RBP10.87□□□□□ -0.67
SSR3-205ENST00000467789 STC2O76061 302 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 CD19P15391 556 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 BMP6P22004 513 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 SLC6A11P48066 632 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 PXNP49023 591 aaPredicted RBP10.87□□□□□ -0.67
SSR3-205ENST00000467789 PGFP49763 221 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 TKTL1P51854 596 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 SEC13P55735 322 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 YWHAGP61981 247 aaKnown RBP eCLIP10.87□□□□□ -0.67
SSR3-205ENST00000467789 GCNT1Q02742 428 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 BYSLQ13895 437 aaKnown RBP10.87□□□□□ -0.67
SSR3-205ENST00000467789 PLK5Q496M5 336 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
SSR3-205ENST00000467789 ISM2Q6H9L7 571 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 Q6ZNB5 142 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 PRR23CQ6ZRP0 262 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 RSRC2Q7L4I2 434 aaKnown RBP10.87□□□□□ -0.67
SSR3-205ENST00000467789 DGLUCYQ7Z3D6 616 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 C12orf40Q86WS4 652 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 TRIM59Q8IWR1 403 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 UBR7Q8N806 425 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 TERB1Q8NA31 727 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 NETO1Q8TDF5 533 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 KCTD13Q8WZ19 329 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 FAM81BQ96LP2 452 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 BBS2Q9BXC9 721 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 LRRC4Q9HBW1 653 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 CHMP5Q9NZZ3 219 aa10.87□□□□□ -0.67
SSR3-205ENST00000467789 MYO18AQ92614 2054 aaKnown RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 NEDD8-MDP1E9PL57 170 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 O00370 1275 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 NPC1O15118 1278 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 GADD45BO75293 160 aaPredicted RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 KLF8O95600 359 aaPredicted RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 ZNF806P0C7X5 589 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 PRKCSHP14314 528 aaPredicted RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 TYRP14679 529 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 ZNF445P59923 1031 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 KDSRQ06136 332 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 PDE4CQ08493 712 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 KCNH2Q12809 1159 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 CNGA2Q16280 664 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 GOLGA7BQ2TAP0 167 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 C10orf76Q5T2E6 689 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 GRAMD4Q6IC98 578 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 LCLAT1Q6UWP7 414 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 KBTBD6Q86V97 674 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 MIB1Q86YT6 1006 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 PPM1KQ8N3J5 372 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 ALLCQ8N6M5 410 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 ZNF513Q8N8E2 541 aaPredicted RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 TXNDC5Q8NBS9 432 aaKnown RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 LMO3Q8TAP4 145 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 DDX1Q92499 740 aaKnown RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 WBP2Q969T9 261 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 PLD4Q96BZ4 506 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 IPO9Q96P70 1041 aaKnown RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 DUSP15Q9H1R2 295 aaPredicted RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 CNGB3Q9NQW8 809 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 VPS45Q9NRW7 570 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 DNAJC17Q9NVM6 304 aaKnown RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 MARCH2Q9P0N8 246 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 TSR3Q9UJK0 312 aaKnown RBP10.86□□□□□ -0.67
SSR3-205ENST00000467789 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.86□□□□□ -0.67
SSR3-205ENST00000467789 PLXND1Q9Y4D7 1925 aa10.86□□□□□ -0.67
SSR3-205ENST00000467789 SGK1O00141 431 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 GFRA2O00451 464 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 BIN1O00499 593 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 ZBTB24O43167 697 aaPredicted RBP10.85□□□□□ -0.67
SSR3-205ENST00000467789 AFPP02771 609 aaKnown RBP10.85□□□□□ -0.67
SSR3-205ENST00000467789 NTSR1P30989 418 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 HOXC13P31276 330 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 DGKGP49619 791 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 ZNF132P52740 706 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 LIMK1P53667 647 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 MESP2Q0VG99 397 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 EFEMP1Q12805 493 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 LRMPQ12912 555 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 MEA1Q16626 185 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 PKDCCQ504Y2 493 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 SPDYCQ5MJ68 293 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 PLA2G2CQ5R387 149 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 SDE2Q6IQ49 451 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 ANO7Q6IWH7 933 aa10.85□□□□□ -0.67
SSR3-205ENST00000467789 ENOSF1Q7L5Y1 443 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms