RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 GOLGA1Q92805 767 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 C18orf8Q96DM3 657 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 SHDQ96IW2 340 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 DNAJC7Q99615 494 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 LINC00597Q9H2U6 94 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 SYNCQ9H7C4 482 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 C8orf33Q9H7E9 229 aaPredicted RBP11.54□□□□□ -0.56
MSH5-212ENST00000467319 ECT2Q9H8V3 914 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 TBC1D14Q9P2M4 693 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 STRIP2Q9ULQ0 834 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 NAALADL1Q9UQQ1 740 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.54□□□□□ -0.561e-9■■■□□ 15.8
MSH5-212ENST00000467319 MUC6Q6W4X9 2439 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 MIA3Q5JRA6 1907 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 TCRBV5S1A1TA0A578 114 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 SLC12A8A0AV02 714 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 HOXC11O43248 304 aaPredicted RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 MFAP3LO75121 409 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 LATS1O95835 1130 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 NCAM1P13591 858 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 CORO1AP31146 461 aaKnown RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 CASP14P31944 242 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 PITX1P78337 314 aaPredicted RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 TBX2Q13207 712 aaPredicted RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 C2CD6Q53TS8 623 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 EFHC1Q5JVL4 640 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 TRNP1Q6NT89 227 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 C1orf228Q6PIY5 440 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 ARCQ7LC44 396 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 FBXL6Q8N531 539 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 TTC16Q8NEE8 873 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 PJA1Q8NG27 643 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 SLC30A5Q8TAD4 765 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 CSGALNACT1Q8TDX6 532 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 NT5C3BQ969T7 300 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 P2RY11Q96G91 374 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 SLC39A13Q96H72 371 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 FCRL2Q96LA5 508 aaPredicted RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 SERPINB11Q96P15 392 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 C11orf70Q9BRQ4 267 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 LRFN3Q9BTN0 628 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 HAUS4Q9H6D7 363 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 LTB4R2Q9NPC1 389 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 MARK1Q9P0L2 795 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 SFMBT1Q9UHJ3 866 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 STOML2Q9UJZ1 356 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 TMEM59LQ9UK28 342 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 LSM7Q9UK45 103 aaKnown RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 NENFQ9UMX5 172 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 LUC7L2Q9Y383 392 aaKnown RBP11.53□□□□□ -0.56
MSH5-212ENST00000467319 WDFY4Q6ZS81 3184 aa11.53□□□□□ -0.56
MSH5-212ENST00000467319 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 DDX3XO00571 662 aaKnown RBP eCLIP11.52□□□□□ -0.57
MSH5-212ENST00000467319 MAN2B1O00754 1011 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 ADH1CP00326 375 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 SERPING1P05155 500 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 AOC1P19801 751 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
MSH5-212ENST00000467319 GJA4P35212 333 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 FLT3P36888 993 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 CLCN5P51795 746 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 ZNF75DP51815 510 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 KPNA1P52294 538 aaPredicted RBP11.52□□□□□ -0.57
MSH5-212ENST00000467319 KLHL30Q0D2K2 578 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 DHCR24Q15392 516 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 FAM102AQ5T9C2 384 aaPredicted RBP11.52□□□□□ -0.57
MSH5-212ENST00000467319 RNF43Q68DV7 783 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 RHBDF2Q6PJF5 856 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 BNIPLQ7Z465 357 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 ETFBKMTQ8IXQ9 262 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 ADGRG2Q8IZP9 1017 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 DEFB106AQ8N104 65 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 C3orf20Q8ND61 904 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 MRFAP1L1Q96HT8 127 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 NPY6RQ99463 290 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 OSBPL6Q9BZF3 934 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 FOXQ1Q9C009 403 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 DCLK3Q9C098 648 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 DLGAP2Q9P1A6 1054 aa11.52□□□□□ -0.57
MSH5-212ENST00000467319 AGO1Q9UL18 857 aaKnown RBP11.52□□□□□ -0.57
MSH5-212ENST00000467319 BZW2Q9Y6E2 419 aaKnown RBP11.52□□□□□ -0.57
MSH5-212ENST00000467319 FAM170AA1A519 330 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 GRAP2O75791 330 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 TRUB2O95900 331 aaKnown RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 CALB1P05937 261 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 HMBSP08397 361 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 PLEKP08567 350 aaPredicted RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 CHRM1P11229 460 aaPredicted RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 ADH5P11766 374 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 SKILP12757 684 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 OPRD1P41143 372 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms