RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 NEU2Q9Y3R4 380 aa18.7■□□□□ 0.58
SNAPC3-205ENST00000467062 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 ASS1P00966 412 aaKnown RBP18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 PIGRP01833 764 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 ERFP50548 548 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 RELAQ04206 551 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 FOLH1Q04609 750 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 MYLK3Q32MK0 819 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 PHF13Q86YI8 300 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 MARVELD2Q8N4S9 558 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 METTL25Q8N6Q8 603 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 CHST13Q8NET6 341 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 SEPT1Q8WYJ6 367 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 KCNK13Q9HB14 408 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 ZNHIT2Q9UHR6 403 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 WDR91A4D1P6 747 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 INO80B-WBP1J3KQ70 363 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 MAFO75444 373 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 KRT1P04264 644 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 FASTKD3Q14CZ7 662 aaKnown RBP18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 LPCAT4Q643R3 524 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 ELP3Q9H9T3 547 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 AK5Q9Y6K8 562 aa18.69■□□□□ 0.58
SNAPC3-205ENST00000467062 TMEM191CA6NGB0 347 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 GOLGA8MH3BSY2 632 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 TOM1L1O75674 476 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 IFNB1P01574 187 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 TMEM191BP0C7N4 346 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 TBXAS1P24557 533 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 SLC5A2P31639 672 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 IGBP1P78318 339 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 TRPC3Q13507 836 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 KRT81Q14533 505 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 CCNG2Q16589 344 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 Q3C1V9 767 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 GJC2Q5T442 439 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 DPH6Q7L8W6 267 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 BRSK2Q8IWQ3 736 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 KATNAL2Q8IYT4 538 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 SNX27Q96L92 541 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 RBM15Q96T37 977 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 ACO2Q99798 780 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 GRIP2Q9C0E4 1043 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 MINDY3Q9H8M7 445 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 TXNRD2Q9NNW7 524 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 PSTPIP1O43586 416 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 PEX1O43933 1283 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 BANF1O75531 89 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 PRKCBP05771 671 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 CD19P15391 556 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 ADRA1DP25100 572 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 PCSK6P29122 969 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 CLCN3P51790 818 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 EEF1DP3Q658K8 133 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 THOC7Q6I9Y2 204 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 ERI1Q8IV48 349 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 FBXO16Q8IX29 292 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 CLPTM1LQ96KA5 538 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 TMEM121Q9BTD3 319 aa18.68■□□□□ 0.58
SNAPC3-205ENST00000467062 PIK3R2O00459 728 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 NOP56O00567 594 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 DDNO94850 711 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 ENO1P06733 434 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 DLDP09622 509 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 ARL4CP56559 192 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 DNAJC24Q6P3W2 148 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 NANOGNBQ7Z5D8 188 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 TTC7BQ86TV6 843 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 EMC1Q8N766 993 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 MRPL4Q9BYD3 311 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 SENP6Q9GZR1 1112 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 UTP6Q9NYH9 597 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 TAGLN3Q9UI15 199 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 SLC24A2Q9UI40 661 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 PARP14Q460N5 1801 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 ZBTB42B2RXF5 422 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 TM9SF1O15321 606 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 DENRO43583 198 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 IQCF3P0C7M6 154 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 KRT4P19013 534 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 SYCP2LQ5T4T6 812 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 CCDC89Q8N998 374 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 EXD1Q8NHP7 514 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 ITPKCQ96DU7 683 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 SLITRK1Q96PX8 696 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 TMEM134Q9H6X4 195 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 PDGFCQ9NRA1 345 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 ARMCX1Q9P291 453 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 CROTQ9UKG9 612 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 CNTN6Q9UQ52 1028 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 SCINQ9Y6U3 715 aa18.67■□□□□ 0.58
SNAPC3-205ENST00000467062 TNFAIP8O95379 198 aa18.66■□□□□ 0.58
SNAPC3-205ENST00000467062 RFC1P35251 1148 aaPredicted RBP18.66■□□□□ 0.58
SNAPC3-205ENST00000467062 ZNF132P52740 706 aa18.66■□□□□ 0.58
SNAPC3-205ENST00000467062 HDAC4P56524 1084 aa18.66■□□□□ 0.58
SNAPC3-205ENST00000467062 CLPPQ16740 277 aaPredicted RBP18.66■□□□□ 0.58
SNAPC3-205ENST00000467062 DUOXA2Q1HG44 320 aa18.66■□□□□ 0.58
SNAPC3-205ENST00000467062 EFHC1Q5JVL4 640 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms