RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 RAD54BQ9Y620 910 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 CCDC189A1A4V9 331 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 RPN2P04844 631 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 RAP1GAPP47736 663 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 HNRNPH2P55795 449 aaKnown RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 MFSD10Q14728 455 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 NLRP9Q7RTR0 991 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 METTL16Q86W50 562 aaKnown RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 ST13P5Q8NFI4 369 aaPredicted RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 MOSPD2Q8NHP6 518 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 KLF6Q99612 283 aaPredicted RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 ANKRD65E5RJM6 399 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 XPO1O14980 1071 aaKnown RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 TRIP10Q15642 601 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 MON2Q7Z3U7 1717 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 ZNF473Q8WTR7 871 aaKnown RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 NT5MQ9NPB1 228 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SATB2Q9UPW6 733 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 TIMM44O43615 452 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 CAPN1P07384 714 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 ZNF24P17028 368 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 IGFBP4P22692 258 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 RPA1P27694 616 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SERPINB1P30740 379 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
HPS4-209ENST00000466781 RAB14P61106 215 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 CYLC2Q14093 348 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 CCNJLQ8IV13 435 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SERPINB12Q96P63 405 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SENP6Q9GZR1 1112 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 UXTQ9UBK9 157 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 LRRC14BA6NHZ5 514 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 PDZK1P1A8MUH7 402 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 B2RBV5 119 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 PEX1O43933 1283 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 COILP38432 576 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 NFYCQ13952 458 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 PTGISQ16647 500 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 CCDC92Q53HC0 331 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 SLC45A4Q5BKX6 768 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 TLK2Q86UE8 772 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 MCOLN3Q8TDD5 553 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 PPP1R10Q96QC0 940 aaKnown RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 PCDHB5Q9Y5E4 795 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 RPS6KL1Q9Y6S9 549 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SERPINB3P29508 390 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SHMT1P34896 483 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 NUMBP49757 651 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 KLK7P49862 253 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 CLCN3P51790 818 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 COPAP53621 1224 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 SKP1P63208 163 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 BTG3Q14201 252 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 TAF13Q15543 124 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 KYNUQ16719 465 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 EPC2Q52LR7 807 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 FAXCQ5TGI0 409 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 TTC33Q6PID6 262 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 CYP20A1Q6UW02 462 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 LPCAT1Q8NF37 534 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 CGRRF1Q99675 332 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 IDI2Q9BXS1 227 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 ATXN3LQ9H3M9 355 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 ELOVL6Q9H5J4 265 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 KLC4Q9NSK0 619 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
HPS4-209ENST00000466781 MSRAQ9UJ68 235 aa8.95□□□□□ -0.98
HPS4-209ENST00000466781 A0A1W2PQJ5 194 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 RGS5O15539 181 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 ZNF682O95780 498 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 PTPRAP18433 802 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 KCNA3P22001 575 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 POU1F1P28069 291 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 NOS3P29474 1203 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 TRIM32Q13049 653 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 ACVR2BQ13705 512 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 KLHL24Q6TFL4 600 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 C15orf52Q6ZUT6 534 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 NT5DC3Q86UY8 548 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 HOMEZQ8IX15 550 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 RGL4Q8IZJ4 473 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 FAM172AQ8WUF8 416 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 NSL1Q96IY1 281 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 HTATIP2Q9BUP3 242 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 GALNT8Q9NY28 637 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 PPIEQ9UNP9 301 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 STIP1P31948 543 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 ALDH5A1P51649 535 aaPredicted RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 NME5P56597 212 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CHRNB3Q05901 458 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 ATP6AP1LQ52LC2 224 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CAPRIN2Q6IMN6 1127 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 ELOA2Q8IYF1 753 aaPredicted RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 ERP27Q96DN0 273 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 LRRC40Q9H9A6 602 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms