RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ENTPD5O75356 428 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 HAUS5O94927 633 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 SNRPAP09012 282 aaKnown RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 IGFBP6P24592 240 aaPredicted RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 GMPRP36959 345 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 NDUFV1P49821 464 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 C16orf46Q6P387 395 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 NOTUMQ6P988 496 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 NCAPGQ9BPX3 1015 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 POPDC2Q9HBU9 364 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 VTA1Q9NP79 307 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 KIAA1257Q9ULG3 409 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 CCDC78A2IDD5 438 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 T-ENOLP0DO92 83 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 TGM2P21980 687 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 L1CAMP32004 1257 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 ARL4AP40617 200 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 CHI3L2Q15782 390 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 C9orf57Q5W0N0 161 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 CLNKQ7Z7G1 428 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
SLX4-202ENST00000466154 ARID3BQ8IVW6 561 aaPredicted RBP16.92■□□□□ 0.3
SLX4-202ENST00000466154 DEFB106AQ8N104 65 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 NKX1-2Q9UD57 310 aaPredicted RBP16.92■□□□□ 0.3
SLX4-202ENST00000466154 KPNA7A9QM74 516 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 I3L4J1 428 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 RARBP10826 455 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 CCNB1P14635 433 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 GTF2A2P52657 109 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 TP53INP2Q8IXH6 220 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 TMEM40Q8WWA1 233 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 ALKBH8Q96BT7 664 aaKnown RBP16.92■□□□□ 0.3
SLX4-202ENST00000466154 SNX27Q96L92 541 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 CSPG4P5Q96PW8 444 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 DHRS4Q9BTZ2 278 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 SLC15A5A6NIM6 579 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 USP12O75317 370 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 ENDOD1O94919 500 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 BEX3Q00994 111 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 GPR142Q7Z601 462 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
SLX4-202ENST00000466154 APPL2Q8NEU8 664 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 RILPQ96NA2 401 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 ARL8BQ9NVJ2 186 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 MCM8Q9UJA3 840 aa16.92■□□□□ 0.3
SLX4-202ENST00000466154 KCNK1O00180 336 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 BST2Q10589 180 aaKnown RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 DCAF4L1Q3SXM0 396 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 TWF2Q6IBS0 349 aaKnown RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 TMEM110Q86TL2 294 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 NUDCD3Q8IVD9 361 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 LINC01465Q8N7H1 131 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 FAM13CQ8NE31 585 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 RSRC1Q96IZ7 334 aaKnown RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 ZFP42Q96MM3 310 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 NUDCD1Q96RS6 583 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 SLC4A5Q9BY07 1137 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 VPS11Q9H270 941 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 ANK1P16157 1881 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 HUS1O60921 280 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 APOEP02649 317 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 SMIM10L2AP0DMW4 78 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 SMIM10L2BP0DMW5 78 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 GSCP56915 257 aaPredicted RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 STILQ15468 1287 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 KYAT1Q16773 422 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 WLSQ5T9L3 541 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 LGSNQ5TDP6 509 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 MCUR1Q96AQ8 359 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 FAM167BQ9BTA0 163 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.91■□□□□ 0.3
SLX4-202ENST00000466154 KANSL3Q9P2N6 904 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 SMIM28A0A1B0GU29 152 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 CAPN9O14815 690 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 MYL3P08590 195 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 TKTP29401 623 aaKnown RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 ELF1P32519 619 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 ABCG1P45844 678 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 RASSF2P50749 326 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 BCAT1P54687 386 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 SLC45A4Q5BKX6 768 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 RFWD3Q6PCD5 774 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 SLC7A6OSQ96CW6 309 aaPredicted RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 DTLQ9NZJ0 730 aa16.91■□□□□ 0.3
SLX4-202ENST00000466154 PPARGC1AQ9UBK2 798 aaKnown RBP16.91■□□□□ 0.3
SLX4-202ENST00000466154 PIGZQ86VD9 579 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 RNF169Q8NCN4 708 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 ZNF670Q9BS34 389 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 M0QYT0 321 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 C2CD2LO14523 706 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 GYG2O15488 501 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 TREHO43280 583 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 MFSD11O43934 449 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 KRT38O76015 456 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 BEST1O76090 585 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 ALADP13716 330 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 CCND1P24385 295 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms