RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 SOCS2O14508 198 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 ZNF213O14771 459 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 DHX16O60231 1041 aaKnown RBP3.54□□□□□ -1.84
CD55-207ENST00000465534 CDC45O75419 566 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 ZRANB2O95218 330 aaKnown RBP eCLIP3.54□□□□□ -1.84
CD55-207ENST00000465534 CCDC172P0C7W6 258 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 OSMP13725 252 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 CCDC144BQ3MJ40 725 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 C1QTNF12Q5T7M4 302 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 MIS18BP1Q6P0N0 1132 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 DLK2Q6UY11 383 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 SLC30A10Q6XR72 485 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 CATSPERGQ6ZRH7 1159 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 KRT26Q7Z3Y9 468 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 TMIEQ8NEW7 156 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 DIS3LQ8TF46 1054 aaKnown RBP3.54□□□□□ -1.84
CD55-207ENST00000465534 ATRIPQ8WXE1 791 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 DPF2Q92785 391 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 MYCBPQ99417 103 aaPredicted RBP3.54□□□□□ -1.84
CD55-207ENST00000465534 C11orf49Q9H6J7 331 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 STK26Q9P289 416 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 SLC45A2Q9UMX9 530 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 SMC3Q9UQE7 1217 aa3.54□□□□□ -1.84
CD55-207ENST00000465534 DDX60LQ5H9U9 1706 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 RP1L1Q8IWN7 2480 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 CYP2D7A0A087X1C5 515 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 MYO1FO00160 1098 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 TULP2O00295 520 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 QSOX1O00391 747 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 POLRMTO00411 1230 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 IPO8O15397 1037 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 EPB41L2O43491 1005 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 SLC43A1O75387 559 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 TECTAO75443 2155 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 CD151P48509 253 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 NDUFV1P49821 464 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 FAPQ12884 760 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 STRN3Q13033 797 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 EIF3AQ14152 1382 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 LTBP2Q14767 1821 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 DAZAP2Q15038 168 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 ZRSR2Q15696 482 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 Q4G0T1 1027 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 FLYWCH1Q4VC44 716 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 FNDC1Q4ZHG4 1894 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 CCDC93Q567U6 631 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 CT47A1Q5JQC4 288 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 AARS2Q5JTZ9 985 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 ANKRD16Q6P6B7 361 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 ZNF365Q70YC5 407 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 IRF2BP2Q7Z5L9 587 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 MRPL10Q7Z7H8 261 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 GALNT16Q8N428 558 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 NANOGP1Q8N7R0 232 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 NRACQ8N912 160 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 PNLDC1Q8NA58 520 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 RAET1EQ8TD07 263 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 FRAT1Q92837 279 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 RAB24Q969Q5 203 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 CHMP4CQ96CF2 233 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 C5orf34Q96MH7 638 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 OSBPL9Q96SU4 736 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 NCAPGQ9BPX3 1015 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 PAIP2Q9BPZ3 127 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 CCDC94Q9BW85 323 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 AMBRA1Q9C0C7 1298 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 PDGFCQ9NRA1 345 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 ZNF277Q9NRM2 450 aaPredicted RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 SALL1Q9NSC2 1324 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 TDP1Q9NUW8 608 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 TRNAU1APQ9NX07 287 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 ZNF112Q9UJU3 913 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 ANAPC4Q9UJX5 808 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 FAM208AQ9UK61 1670 aaKnown RBP3.53□□□□□ -1.84
CD55-207ENST00000465534 INTUQ9ULD6 942 aa3.53□□□□□ -1.84
CD55-207ENST00000465534 RELNP78509 3460 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 RPGRIP1LQ68CZ1 1315 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 KIF16BQ96L93 1317 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 SYNRGQ9UMZ2 1314 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 A0A087X0B3 334 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 KLHL33A6NCF5 533 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 HMGB1P1B2RPK0 211 aaPredicted RBP3.52□□□□□ -1.85
CD55-207ENST00000465534 ADAMTS3O15072 1205 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 KIF1CO43896 1103 aaKnown RBP3.52□□□□□ -1.85
CD55-207ENST00000465534 NEFHP12036 1026 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 IARSP41252 1262 aaKnown RBP3.52□□□□□ -1.85
CD55-207ENST00000465534 SHC2P98077 582 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 DDR1Q08345 913 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 CDC37Q16543 378 aaPredicted RBP3.52□□□□□ -1.85
CD55-207ENST00000465534 TEDDM1Q5T9Z0 273 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 CCDC181Q5TID7 509 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 CLEC4GQ6UXB4 293 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 GET4Q7L5D6 327 aaPredicted RBP3.52□□□□□ -1.85
CD55-207ENST00000465534 POC1BQ8TC44 478 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 MARK4Q96L34 752 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 SMC4Q9NTJ3 1288 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 DONSONQ9NYP3 566 aa3.52□□□□□ -1.85
CD55-207ENST00000465534 DMDP11532 3685 aa3.51□□□□□ -1.85
CD55-207ENST00000465534 PRRC2BQ5JSZ5 2229 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms