RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 POPDC2Q9HBU9 364 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 TRPM5Q9NZQ8 1165 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 ZNF638Q14966 1978 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 MIF4GDA9UHW6 222 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 NRG2O14511 850 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 MYL4P12829 197 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 TNFRSF8P28908 595 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 CCR2P41597 374 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 PPP3CCP48454 512 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 PSEN1P49768 467 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 NTHL1P78549 312 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 CCDC85BQ15834 202 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 PABPC1LQ4VXU2 614 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 SYPL2Q5VXT5 272 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 BTBD8Q5XKL5 378 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 EP400NLQ6ZTU2 488 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 BEND5Q7L4P6 421 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 GPR149Q86SP6 731 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 DEFB106AQ8N104 65 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 ZNF564Q8TBZ8 553 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 S1PR5Q9H228 398 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 PIDD1Q9HB75 910 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 ABCC13Q9NSE7 274 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 RBM12Q9NTZ6 932 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 CLIC5Q9NZA1 410 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 NAALADL1Q9UQQ1 740 aa17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 SPTBN5Q9NRC6 3674 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-203ENST00000465229 C2CD4BA6NLJ0 364 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 PGRMC1O00264 195 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 FOSL2P15408 326 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 PDGFRAP16234 1089 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 OGDHQ02218 1023 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 DCAF6Q58WW2 860 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 CCNI2Q6ZMN8 369 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 LEMD2Q8NC56 503 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 RXFP2Q8WXD0 754 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 TCEAL4Q96EI5 215 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 DDX23Q9BUQ8 820 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 CARD9Q9H257 536 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 GOLPH3Q9H4A6 298 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 CDH22Q9UJ99 828 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 A0A1W2PRU2 124 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 MOSPD3O75425 235 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 DAB1O75553 588 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 NCAM1P13591 858 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 RARGP13631 454 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 NOS2P35228 1153 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 MATKP42679 507 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 SLC5A9Q2M3M2 681 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 C8orf74Q6P047 294 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 PDZD4Q76G19 769 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 BTBD6Q96KE9 485 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 MSLNLQ96KJ4 702 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 LRRC1Q9BTT6 524 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 TRIM62Q9BVG3 475 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 ADAM7Q9H2U9 754 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 ATXN3LQ9H3M9 355 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 STIM2Q9P246 746 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 ANAPC7Q9UJX3 599 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 NUDT5Q9UKK9 219 aa17.65■□□□□ 0.42
EXOSC3-203ENST00000465229 CCDC188H7C350 402 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 CAPN9O14815 690 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 DDX3YO15523 660 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 CEP104O60308 925 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 SASH3O75995 380 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 FGF19O95750 216 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 TBX18O95935 607 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 RALAP11233 206 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 GJA1P17302 382 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 CDC25CP30307 473 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 ZNF252P-AS1Q0IIN9 211 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 CCDC14Q49A88 953 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 PRSS36Q5K4E3 855 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 ZNF276Q8N554 614 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 SHKBP1Q8TBC3 707 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 FNIP1Q8TF40 1166 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 NT5C3BQ969T7 300 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 CCSER2Q9H7U1 834 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 SMARCAL1Q9NZC9 954 aa17.64■□□□□ 0.41
EXOSC3-203ENST00000465229 C5orf42Q9H799 3197 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 NOTCH4Q99466 2003 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 C2orf78A6NCI8 922 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 MYO1FO00160 1098 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 TLR5O60602 858 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 TFE3P19532 575 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 GPD1P21695 349 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 DNA2P51530 1060 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 ZNF143P52747 638 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 PITX1P78337 314 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 CYP4F8P98187 520 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 MRPS31Q92665 395 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 ADAM33Q9BZ11 813 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 VIPAS39Q9H9C1 493 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 ALG6Q9Y672 507 aa17.63■□□□□ 0.41
EXOSC3-203ENST00000465229 ZNF197O14709 1029 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms