RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CCNB1P14635 433 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 IBSPP21815 317 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 ACAT1P24752 427 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 ETV4P43268 484 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 RPL34P49207 117 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 CCDC15Q0P6D6 951 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 SWT1Q5T5J6 900 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 APBB1IPQ7Z5R6 666 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 TMEM237Q96Q45 408 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 SNX25Q9H3E2 840 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 DTLQ9NZJ0 730 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 UNC5CO95185 931 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 TARSP26639 723 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 NEK3P51956 506 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 E2F5Q15329 346 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 CCL14Q16627 93 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 SLC45A4Q5BKX6 768 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 TRMT10BQ6PF06 316 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 LRRC6Q86X45 466 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 DEFB106AQ8N104 65 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 SMG8Q8ND04 991 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 APPL2Q8NEU8 664 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 RFWD2Q8NHY2 731 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 TBC1D31Q96DN5 1066 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 PNPLA8Q9NP80 782 aa19.37■□□□□ 0.69
TSPAN4-210ENST00000464987 SYNJ2BP-COX16A0A087WUM0 186 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 TRIM49D1C9J1S8 452 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 VAV1P15498 845 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 NDUFV1P49821 464 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 SLC18A2Q05940 514 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 ADIGQ0VDE8 80 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 PIGZQ86VD9 579 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 VSIG1Q86XK7 387 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 CEP57Q86XR8 500 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 ADGRF2Q8IZF7 708 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 FAM149B1Q96BN6 582 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 ALKBH8Q96BT7 664 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 LRRC37BQ96QE4 947 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 PARK7Q99497 189 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 MANSC1Q9H8J5 431 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 GDAP2Q9NXN4 497 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 COX16Q9P0S2 106 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 KANSL3Q9P2N6 904 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 DCTN4Q9UJW0 460 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 IPPQ9Y573 584 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 USP3Q9Y6I4 520 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 MEIS3P2A8K0S8 358 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 CD4P01730 458 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 MAGEA6P43360 314 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 TAF6P49848 677 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 LILRA4P59901 499 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 BMPR2Q13873 1038 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 OTUD1Q5VV17 481 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 UNC5AQ6ZN44 842 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 CDKL3Q8IVW4 592 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 TTC17Q96AE7 1141 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 APOPT1Q96IL0 206 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 SIGLEC10Q96LC7 697 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 ZFP42Q96MM3 310 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.36■□□□□ 0.693e-6■■■□□ 18.3
TSPAN4-210ENST00000464987 HAO1Q9UJM8 370 aa19.36■□□□□ 0.69
TSPAN4-210ENST00000464987 DHRS4L1P0CG22 281 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 ZNF865P0CJ78 1059 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 CSH1P0DML2 217 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 CSH2P0DML3 217 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 DESP17661 470 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 PSEN2P49810 448 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 SNX16P57768 344 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 XKR4Q5GH76 650 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 SPRYD7Q5W111 196 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 SLC26A11Q86WA9 606 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 UTP4Q969X6 686 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 LGMNQ99538 433 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 VPS11Q9H270 941 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 PIH1D1Q9NWS0 290 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 MAD1L1Q9Y6D9 718 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 TSC2P49815 1807 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 GCATO75600 419 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 SPAG6O75602 509 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 MYL3P08590 195 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 T-ENOLP0DO92 83 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 MAGEA3P43357 314 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 SULT1E1P49888 294 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 CDC42EP1Q00587 391 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 PAQR9Q6ZVX9 377 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 VPS52Q8N1B4 723 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 B3GALNT2Q8NCR0 500 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 ZNF560Q96MR9 790 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 CEP41Q9BYV8 373 aa19.35■□□□□ 0.69
TSPAN4-210ENST00000464987 IQCA1LA6NCM1 817 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 CBX6O95503 412 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 APOEP02649 317 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 ALADP13716 330 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 KCNE1P15382 129 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 BGNP21810 368 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 CBLBQ13191 982 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 SETDB1Q15047 1291 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 DCAF6Q58WW2 860 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 DENND5BQ6ZUT9 1274 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms