RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 BORAQ6PGQ7 559 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 UNC5AQ6ZN44 842 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TMC7Q7Z402 723 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 ADGRF2Q8IZF7 708 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 AHI1Q8N157 1196 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FBXW8Q8N3Y1 598 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CATSPER1Q8NEC5 780 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PPP1R14CQ8TAE6 165 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PPP1R14BQ96C90 147 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MAML3Q96JK9 1138 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 RMDN3Q96TC7 470 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 APOL6Q9BWW8 343 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 RBM38Q9H0Z9 239 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 TMEM134Q9H6X4 195 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 ZNF696Q9H7X3 374 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TIMMDC1Q9NPL8 285 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 RAB6BQ9NRW1 208 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 ETNK2Q9NVF9 386 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 GALNT8Q9NY28 637 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 HSFX1Q9UBD0 423 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 RAB26Q9ULW5 256 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PADI4Q9UM07 663 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PSMD13Q9UNM6 376 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 WDR81Q562E7 1941 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 SCN4AP35499 1836 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 BCLAF3A2AJT9 711 aaKnown RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 TESPA1A2RU30 521 aaPredicted RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 SLC15A5A6NIM6 579 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 H7C0C1 242 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 TOM1L1O75674 476 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 PDE5AO76074 875 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 PROCP04070 461 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 CCDC130P13994 396 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 KCNA2P16389 499 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 TGM2P21980 687 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 CCND2P30279 289 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 SERPINB6P35237 376 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 ALDH1A3P47895 512 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 ATP5OP48047 213 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 SLC1A6P48664 564 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 IDH3AP50213 366 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 MTTPP55157 894 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 USP46P62068 366 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 HPCAP84074 193 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 NAB1Q13506 487 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 LRRC36Q1X8D7 754 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 XKR3Q5GH77 459 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 DENND5BQ6ZUT9 1274 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 ILDR2Q71H61 639 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 XYLT1Q86Y38 959 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 PQLC1Q8N2U9 271 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 DEPTORQ8TB45 409 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 PPP4R1Q8TF05 950 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 HSPH1Q92598 858 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 NMD3Q96D46 503 aaKnown RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 DCUN1D1Q96GG9 259 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 ZBTB45Q96K62 511 aaPredicted RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 CATSPER2Q96P56 530 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 EBNA1BP2Q99848 306 aaKnown RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 CALN1Q9BXU9 219 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 GCOM2Q9BZD3 368 aaPredicted RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 PORCNQ9H237 461 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 PREBQ9HCU5 417 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 DNAAF2Q9NVR5 837 aaKnown RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 CLIC5Q9NZA1 410 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 PRPF19Q9UMS4 504 aaKnown RBP7.54□□□□□ -1.2
USP48-206ENST00000464577 USP18Q9UMW8 372 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 DMTF1Q9Y222 760 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 SSC5DA1L4H1 1573 aa7.54□□□□□ -1.2
USP48-206ENST00000464577 K7ERI5 159 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 TXNDC9O14530 226 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 ITM2AO43736 263 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 UGT1A9O60656 530 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 PLIN3O60664 434 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 OR6B1O95007 311 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 TNFAIP8O95379 198 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 CLPTM1O96005 669 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 CST3P01034 146 aaPredicted RBP7.53□□□□□ -1.2
USP48-206ENST00000464577 TFAP2AP05549 437 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 TPSB2P20231 275 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 ARL2P36404 184 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 ASPAP45381 313 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 HSPA13P48723 471 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 MNX1P50219 401 aaPredicted RBP7.53□□□□□ -1.2
USP48-206ENST00000464577 NRLP54845 237 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 INHBCP55103 352 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 MYL6P60660 151 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 APOFQ13790 326 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 TLR1Q15399 786 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 SURF1Q15526 300 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 TAF5Q15542 800 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 TPSAB1Q15661 275 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 ADRM1Q16186 407 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 GRAMD1BQ3KR37 738 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 FSCBQ5H9T9 825 aa7.53□□□□□ -1.2
USP48-206ENST00000464577 ARHGEF16Q5VV41 709 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms