RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ARIH1Q9Y4X5 557 aaPredicted RBP17.81■□□□□ 0.44
VPS52-215ENST00000464425 EGFP01133 1207 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 KLKB1P03952 638 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 ADH5P11766 374 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 MAGEA9P43362 315 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 SLC6A11P48066 632 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 ZNF75DP51815 510 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CCINQ13939 588 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 ANO4Q32M45 955 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 Q6ZNB5 142 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 Q6ZS52 159 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 DENND1CQ8IV53 801 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 BAP1Q92560 729 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 ATOH1Q92858 354 aaPredicted RBP17.8■□□□□ 0.44
VPS52-215ENST00000464425 NOX5Q96PH1 765 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CPXM1Q96SM3 734 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CHRDQ9H2X0 955 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 SPHK2Q9NRA0 654 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CAPN11Q9UMQ6 739 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CEP83Q9Y592 693 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CACNA1IQ9P0X4 2223 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 CACNA1HO95180 2353 aa17.8■□□□□ 0.44
VPS52-215ENST00000464425 MYOFQ9NZM1 2061 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 SART1O43290 800 aaKnown RBP17.79■□□□□ 0.44
VPS52-215ENST00000464425 MSI1O43347 362 aaKnown RBP17.79■□□□□ 0.44
VPS52-215ENST00000464425 FYNP06241 537 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 NCAM1P13591 858 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 CORO1AP31146 461 aaKnown RBP17.79■□□□□ 0.44
VPS52-215ENST00000464425 OPRD1P41143 372 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 TRIM14Q14142 442 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 GAS6Q14393 721 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 TPGS1Q6ZTW0 290 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 C12orf40Q86WS4 652 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 NAT16Q8N8M0 369 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
VPS52-215ENST00000464425 SLC20A1Q8WUM9 679 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 DDX1Q92499 740 aaKnown RBP17.79■□□□□ 0.44
VPS52-215ENST00000464425 EXOC4Q96A65 974 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 NUCKS1Q9H1E3 243 aaKnown RBP17.79■□□□□ 0.44
VPS52-215ENST00000464425 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 FAM86C1Q9NVL1 165 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 NAALADL1Q9UQQ1 740 aa17.79■□□□□ 0.44
VPS52-215ENST00000464425 LAMTOR5O43504 91 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 ERBB2P04626 1255 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 MMEP08473 750 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 CCDC172P0C7W6 258 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 DRD1P21728 446 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 ARID5AQ03989 594 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 GAD2Q05329 585 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 TAF5Q15542 800 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 OR6B2Q6IFH4 312 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 MAML2Q8IZL2 1156 aaPredicted RBP17.78■□□□□ 0.44
VPS52-215ENST00000464425 TMEM35BQ8NCS4 154 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 EPS8L1Q8TE68 723 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 BHMTQ93088 406 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 PLD4Q96BZ4 506 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 PIWIL1Q96J94 861 aaKnown RBP17.78■□□□□ 0.44
VPS52-215ENST00000464425 DCLK3Q9C098 648 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 AIPL1Q9NZN9 384 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 AGO1Q9UL18 857 aaKnown RBP17.78■□□□□ 0.44
VPS52-215ENST00000464425 ZNF510Q9Y2H8 683 aa17.78■□□□□ 0.44
VPS52-215ENST00000464425 HBS1LQ9Y450 684 aaKnown RBP17.78■□□□□ 0.44
VPS52-215ENST00000464425 GOLGA6L3A6NEY3 463 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 CAPN9O14815 690 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 GYPCP04921 128 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 FERP16591 822 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 HARS2P49590 506 aaKnown RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 YWHAZP63104 245 aaKnown RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 ZBED6P86452 979 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 NHLH1Q02575 133 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 CSTF1Q05048 431 aaKnown RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 TRIP4Q15650 581 aaPredicted RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 PTPN20Q4JDL3 420 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 SYPL2Q5VXT5 272 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 MSANTD2Q6P1R3 559 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 TSSK4Q6SA08 328 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 FAM183BPQ6ZVS7 135 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 SYNPOQ8N3V7 929 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 ADAM32Q8TC27 787 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 SYN2Q92777 582 aaPredicted RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 EZH1Q92800 747 aaPredicted RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 BBS2Q9BXC9 721 aa17.77■□□□□ 0.44
VPS52-215ENST00000464425 NOCTQ9UK39 431 aaKnown RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 LUC7L2Q9Y383 392 aaKnown RBP17.77■□□□□ 0.44
VPS52-215ENST00000464425 LRRC53A6NM62 1247 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 NEDD8-MDP1E9PL57 170 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 HOXC11O43248 304 aaPredicted RBP17.76■□□□□ 0.43
VPS52-215ENST00000464425 GRAP2O75791 330 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 CHRNB2P17787 502 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 SNX16P57768 344 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 SATB1Q01826 763 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 MESP2Q0VG99 397 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 IRF2BP2Q7Z5L9 587 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 ZNF677Q86XU0 584 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 SFTPA1Q8IWL2 248 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 DQX1Q8TE96 717 aaKnown RBP17.76■□□□□ 0.43
VPS52-215ENST00000464425 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
VPS52-215ENST00000464425 CPA5Q8WXQ8 436 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 FAM122AQ96E09 287 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 PNKPQ96T60 521 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms