RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ROBO3Q96MS0 1386 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 A0A096LPK6 155 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 ARHGAP10A1A4S6 786 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SYCE1LA8MT33 242 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 USP1O94782 785 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TCF4P15884 667 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 XPAP23025 273 aaPredicted RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 ADSSP30520 456 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SPIRE1Q08AE8 756 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 XRCC4Q13426 336 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 UGP2Q16851 508 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 FAM83EQ2M2I3 478 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 THEMIS2Q5TEJ8 643 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 NOTUMQ6P988 496 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 FASTKD5Q7L8L6 764 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 PTAR1Q7Z6K3 402 aaPredicted RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 FAM13CQ8NE31 585 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.34□□□□□ -0.91
HPS4-208ENST00000464362 CPXM1Q96SM3 734 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 MAGEB5Q9BZ81 275 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 ARL8BQ9NVJ2 186 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 DDX18Q9NVP1 670 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 GON4LQ3T8J9 2241 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TYW5A2RUC4 315 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 TBC1D12O60347 775 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 CYP2C8P10632 490 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 IL10P22301 178 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 MRPS22P82650 360 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 ZNF268Q14587 947 aaPredicted RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 TMEM132BQ14DG7 1078 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 RBBP7Q16576 425 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SLC45A4Q5BKX6 768 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SEL1L3Q68CR1 1132 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 HTR3CQ8WXA8 447 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 CNDP1Q96KN2 507 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SNRNP25Q9BV90 132 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 LRRC40Q9H9A6 602 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 NOCTQ9UK39 431 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 KNL1Q8NG31 2342 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 ATP8B3O60423 1300 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 CASTOR2A6NHX0 329 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 VAPBO95292 243 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TKTL1P51854 596 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 NAGLUP54802 743 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 DCAF4L1Q3SXM0 396 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 ZPBP2Q6X784 338 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 MOB2Q70IA6 237 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TFAP2DQ7Z6R9 452 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 CMC1Q7Z7K0 106 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SNX32Q86XE0 403 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SPATA6LQ8N4H0 392 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SAMD3Q8N6K7 520 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 GLIS1Q8NBF1 620 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TLCD1Q96CP7 247 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 APBA2Q99767 749 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 NMUR2Q9GZQ4 415 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 TCF7L2Q9NQB0 619 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 OLA1Q9NTK5 396 aaKnown RBP9.34□□□□□ -0.91
HPS4-208ENST00000464362 VANGL2Q9ULK5 521 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 LRCH1Q9Y2L9 728 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 STARD13Q9Y3M8 1113 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 MYH6P13533 1939 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
HPS4-208ENST00000464362 CD4P01730 458 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 PTPRAP18433 802 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 MMP8P22894 467 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 MGAT5Q09328 741 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 LBRQ14739 615 aaKnown RBP9.34□□□□□ -0.92
HPS4-208ENST00000464362 HSDL1Q3SXM5 330 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 AGKQ53H12 422 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 FBXO47Q5MNV8 452 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 TXNRD3NBQ6F5E7 133 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 NAPEPLDQ6IQ20 393 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 NIPA1Q7RTP0 329 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 SZRD1Q7Z422 152 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 ZBTB46Q86UZ6 589 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 ZNF786Q8N393 782 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.92
HPS4-208ENST00000464362 SHCBP1Q8NEM2 672 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 INPP5DQ92835 1189 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 TUBGCP3Q96CW5 907 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 FRMD8Q9BZ67 464 aaPredicted RBP9.34□□□□□ -0.92
HPS4-208ENST00000464362 STX18Q9P2W9 335 aaKnown RBP9.34□□□□□ -0.92
HPS4-208ENST00000464362 TJP2Q9UDY2 1190 aa9.34□□□□□ -0.92
HPS4-208ENST00000464362 UBQLN1Q9UMX0 589 aaKnown RBP9.34□□□□□ -0.92
HPS4-208ENST00000464362 TMEM191CA6NGB0 347 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SUPT3HB4E1H0 165 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 BUD23O43709 281 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 PGM3O95394 542 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 PSMG1O95456 288 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ETS2P15036 469 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 PSMB4P28070 264 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FOXN2P32314 431 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ACADSBP45954 432 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 PEX5P50542 639 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms