RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 RAB41Q5JT25 222 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 OTUD1Q5VV17 481 aaPredicted RBP18.13■□□□□ 0.49
LMO2-204ENST00000464025 NCBP2-AS2Q69YL0 99 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 AGMOQ6ZNB7 445 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 KLHDC9Q8NEP7 349 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 MGARPQ8TDB4 240 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 WNT8BQ93098 351 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 SYT15Q9BQS2 421 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 PLCD4Q9BRC7 762 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 POPDC2Q9HBU9 364 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 CNGB3Q9NQW8 809 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 RRN3Q9NYV6 651 aa18.13■□□□□ 0.49
LMO2-204ENST00000464025 COL4A4P53420 1690 aaPredicted RBP18.12■□□□□ 0.49
LMO2-204ENST00000464025 CCT8L1PA6NM43 557 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 MEIS3P2A8K0S8 358 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 TRDMT1O14717 391 aaKnown RBP18.12■□□□□ 0.49
LMO2-204ENST00000464025 BEST1O76090 585 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 MSH2P43246 934 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 NRLP54845 237 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 GBE1Q04446 702 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 ACTN3Q08043 901 aaPredicted RBP18.12■□□□□ 0.49
LMO2-204ENST00000464025 SPARCL1Q14515 664 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 DSC3Q14574 896 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 MDH1BQ5I0G3 518 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 DCAKDQ8WVC6 231 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 NTAN1Q96AB6 310 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 PGAP3Q96FM1 320 aaPredicted RBP18.12■□□□□ 0.49
LMO2-204ENST00000464025 PAFAH2Q99487 392 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 ELAC2Q9BQ52 826 aaKnown RBP18.12■□□□□ 0.49
LMO2-204ENST00000464025 DTLQ9NZJ0 730 aa18.12■□□□□ 0.49
LMO2-204ENST00000464025 TDRD15B5MCY1 1934 aaKnown RBP18.11■□□□□ 0.49
LMO2-204ENST00000464025 H3BRJ5 948 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 CLDN5O00501 218 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 PGK1P00558 417 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 CYP11A1P05108 521 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 ACAT1P24752 427 aaKnown RBP18.11■□□□□ 0.49
LMO2-204ENST00000464025 CLCNKBP51801 687 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 UPP1Q16831 310 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 DCAF6Q58WW2 860 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 RNF187Q5TA31 235 aaPredicted RBP18.11■□□□□ 0.49
LMO2-204ENST00000464025 CCSAPQ6IQ19 270 aaPredicted RBP18.11■□□□□ 0.49
LMO2-204ENST00000464025 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 IGDCC3Q8IVU1 814 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 VPS52Q8N1B4 723 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 SIX6OS1Q8N1H7 587 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 SCML4Q8N228 414 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 FAM149B1Q96BN6 582 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 HHIPL1Q96JK4 782 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 MED10Q9BTT4 135 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 AGO3Q9H9G7 860 aaKnown RBP18.11■□□□□ 0.49
LMO2-204ENST00000464025 ETNK1Q9HBU6 452 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 SQORQ9Y6N5 450 aa18.11■□□□□ 0.49
LMO2-204ENST00000464025 ZWINTO95229 277 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 TAC1P20366 129 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 AMPD1P23109 780 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 PCSK1P29120 753 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 FLT3LGP49771 235 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 LIG3P49916 1009 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 TKTL1P51854 596 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 DAOAP59103 153 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 CDK16Q00536 496 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 SCAPQ12770 1279 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 SEMA5AQ13591 1074 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 PAFAH1B3Q15102 231 aaKnown RBP18.1■□□□□ 0.49
LMO2-204ENST00000464025 FAM26DQ5JW98 314 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 NUGGCQ68CJ6 796 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 DSTYKQ6XUX3 929 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 CAPN12Q6ZSI9 719 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 FAM35AQ86V20 835 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 CAND1Q86VP6 1230 aaKnown RBP18.1■□□□□ 0.49
LMO2-204ENST00000464025 SLC44A1Q8WWI5 657 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 TGS1Q96RS0 853 aaKnown RBP18.1■□□□□ 0.49
LMO2-204ENST00000464025 SMOQ99835 787 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 CSNK1G1Q9HCP0 422 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 KRT82Q9NSB4 513 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 GABRQQ9UN88 632 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 CHMP2BQ9UQN3 213 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 USP15Q9Y4E8 981 aaPredicted RBP18.1■□□□□ 0.49
LMO2-204ENST00000464025 RAD54BQ9Y620 910 aa18.1■□□□□ 0.49
LMO2-204ENST00000464025 A0A0U1RQF3 1178 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 IQANK1A0A1B0GTG1 560 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 TCRBV9S1A1TA0A576 114 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 KBTBD13C9JR72 458 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 C1QAP02745 245 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 GSTA1P08263 222 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 SKIP12755 728 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 GOT1P17174 413 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 IGFBP6P24592 240 aaPredicted RBP18.09■□□□□ 0.49
LMO2-204ENST00000464025 HCAR3P49019 387 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 ZNF135P52742 658 aaPredicted RBP18.09■□□□□ 0.49
LMO2-204ENST00000464025 CYS1Q717R9 158 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 FAM131BQ86XD5 332 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 TFB1MQ8WVM0 346 aaKnown RBP18.09■□□□□ 0.49
LMO2-204ENST00000464025 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 XAB2Q9HCS7 855 aaKnown RBP18.09■□□□□ 0.49
LMO2-204ENST00000464025 ARHGEF4Q9NR80 690 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 PRKAG3Q9UGI9 489 aa18.09■□□□□ 0.49
LMO2-204ENST00000464025 ZNF180Q9UJW8 692 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms