RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SORCS1Q8WY21 1168 aa16.53■□□□□ 0.24
SND1-203ENST00000463020 DNASE2BQ8WZ79 361 aa16.53■□□□□ 0.24
SND1-203ENST00000463020 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
SND1-203ENST00000463020 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
SND1-203ENST00000463020 COMMD8Q9NX08 183 aa16.53■□□□□ 0.24
SND1-203ENST00000463020 BTBD3Q9Y2F9 522 aa16.53■□□□□ 0.24
SND1-203ENST00000463020 STC2O76061 302 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 ATXN1LP0C7T5 689 aaKnown RBP16.52■□□□□ 0.24
SND1-203ENST00000463020 RARGP13631 454 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 TPMTP51580 245 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 COPAP53621 1224 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 MFAP3P55082 362 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 CLDN10P78369 228 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 DCAF12L1Q5VU92 463 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 FYB2Q5VWT5 728 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 SDE2Q6IQ49 451 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 C1orf216Q8TAB5 229 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 TNIP3Q96KP6 325 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 MIR1-1HGQ9H1L0 117 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 FAM124BQ9H5Z6 455 aaPredicted RBP16.52■□□□□ 0.24
SND1-203ENST00000463020 CCDC86Q9H6F5 360 aaKnown RBP16.52■□□□□ 0.24
SND1-203ENST00000463020 PRDM16Q9HAZ2 1276 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 TLR8Q9NR97 1041 aaKnown RBP16.52■□□□□ 0.24
SND1-203ENST00000463020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.52■□□□□ 0.24
SND1-203ENST00000463020 WDR35Q9P2L0 1181 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 TFIP11Q9UBB9 837 aaKnown RBP16.52■□□□□ 0.24
SND1-203ENST00000463020 SCML2Q9UQR0 700 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 PCDHB9Q9Y5E1 797 aa16.52■□□□□ 0.24
SND1-203ENST00000463020 UBE4BO95155 1302 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 ACACAQ13085 2346 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 MEI4A8MW99 385 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 EXOC3O60645 756 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 CILPO75339 1184 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 CLSTN1O94985 981 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 ZIC2O95409 532 aaPredicted RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 PENKP01210 267 aaPredicted RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 ACO1P21399 889 aaKnown RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 PRKCHP24723 683 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 ATP5C1P36542 298 aaKnown RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 CUL4BQ13620 913 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 ENPP2Q13822 863 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 HNRNPDQ14103 355 aaKnown RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 PREPLQ4J6C6 727 aaPredicted RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 TMEM215Q68D42 235 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 LAYNQ6UX15 382 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 UNC13DQ70J99 1090 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 GLRX5Q86SX6 157 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 CRYBG2Q8N1P7 616 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 GAREM1Q9H706 876 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 APOBEC3GQ9HC16 384 aaKnown RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 ITM2CQ9NQX7 267 aa16.51■□□□□ 0.23
SND1-203ENST00000463020 THAP10Q9P2Z0 257 aaPredicted RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 HELZ2Q9BYK8 2649 aaKnown RBP16.51■□□□□ 0.23
SND1-203ENST00000463020 A0A1B0GTW7 788 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 GFRA2O00451 464 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 DKK1O94907 266 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 HMBSP08397 361 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 STK38Q15208 465 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 HLA-BQ31612 363 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 WDR45BQ5MNZ6 344 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 C10orf120Q5SQS8 335 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 SYCP2LQ5T4T6 812 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 NUDT18Q6ZVK8 323 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 SETD7Q8WTS6 366 aaKnown RBP16.5■□□□□ 0.23
SND1-203ENST00000463020 FOXJ1Q92949 421 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 PIWIL1Q96J94 861 aaKnown RBP16.5■□□□□ 0.23
SND1-203ENST00000463020 FBXO44Q9H4M3 255 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 DMAC2Q9NW81 257 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 SUSD2Q9UGT4 822 aa16.5■□□□□ 0.23
SND1-203ENST00000463020 EIF2B4Q9UI10 523 aaKnown RBP16.5■□□□□ 0.23
SND1-203ENST00000463020 A0A1B0GVT2 93 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 FAM149AA5PLN7 773 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 GOLGA8CPA6NN73 597 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 SPTLC2O15270 562 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 FAM200BP0CF97 657 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 GNSP15586 552 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 PDCP20941 246 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
SND1-203ENST00000463020 ZNF234Q14588 700 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 KNOP1Q1ED39 458 aaKnown RBP16.49■□□□□ 0.23
SND1-203ENST00000463020 ZACNQ401N2 412 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 KCNT1Q5JUK3 1230 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 METTL3Q86U44 580 aaKnown RBP16.49■□□□□ 0.23
SND1-203ENST00000463020 FAM124AQ86V42 546 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 TMPRSS6Q8IU80 811 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 KIAA0895Q8NCT3 520 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 LRIG1Q96JA1 1093 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 TM7SF3Q9NS93 570 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 LSM7Q9UK45 103 aaKnown RBP16.49■□□□□ 0.23
SND1-203ENST00000463020 SLC27A6Q9Y2P4 619 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 NUMA1Q14980 2115 aa16.49■□□□□ 0.23
SND1-203ENST00000463020 MUC22E2RYF6 1773 aaPredicted RBP16.49■□□□□ 0.23
SND1-203ENST00000463020 CFAP46Q8IYW2 2715 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 METTL12A8MUP2 240 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 KCNK3O14649 394 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 KLRC4O43908 158 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
SND1-203ENST00000463020 HLA-EP13747 358 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms