RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 VPS33AQ96AX1 596 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 SEMA6AQ9H2E6 1030 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 MAGEB16A2A368 324 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 EVPLLA8MZ36 301 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 CHADO15335 359 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 TRMUO75648 421 aaKnown RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 VDRP11473 427 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 TRIM25Q14258 630 aaKnown RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 KHDC1Q4VXA5 237 aaKnown RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 ISLR2Q6UXK2 745 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 ZFAND2BQ8WV99 257 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 THUMPD3Q9BV44 507 aaKnown RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 CLK4Q9HAZ1 481 aaKnown RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 PNMA8CA0A1B0GUJ8 204 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 ITGAVP06756 1048 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 S100A1P23297 94 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 NDUFA5Q16718 116 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 CDC42EP5Q6NZY7 148 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 SLC22A9Q8IVM8 553 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 THEM5Q8N1Q8 247 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 IPMKQ8NFU5 416 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 ZSCAN18Q8TBC5 510 aaPredicted RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 BTBD9Q96Q07 612 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 LZTS3O60299 673 aaPredicted RBP16.24■□□□□ 0.19
SMC4-204ENST00000462787 VCLP18206 1134 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 AVPR1AP37288 418 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 FAM71AQ8IYT1 594 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 ACMSDQ8TDX5 336 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 ABHD8Q96I13 439 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 KCTD10Q9H3F6 313 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 GPRC5CQ9NQ84 441 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 RAB26Q9ULW5 256 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 PPLO60437 1756 aa16.24■□□□□ 0.19
SMC4-204ENST00000462787 RGSL1A5PLK6 1076 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 PDZK1P1A8MUH7 402 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 RGS5O15539 181 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 SOAT2O75908 522 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 ATP6V1B2P21281 511 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 FAM98BQ52LJ0 330 aaKnown RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 TTC7BQ86TV6 843 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 ZNF606Q8WXB4 792 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 SLITRK1Q96PX8 696 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 TMEM165Q9HC07 324 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 CHD1O14646 1710 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 MAP3K13O43283 966 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 CYTH3O43739 400 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 MFN2O95140 757 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 PTPN7P35236 360 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 CBX3Q13185 183 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 KDELC2Q7Z4H8 507 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 RP9Q8TA86 221 aaKnown RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 TBCBQ99426 244 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 FAM49BQ9NUQ9 324 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 COMMD8Q9NX08 183 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 TUBGCP4Q9UGJ1 667 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 H3BNX3 289 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 ZNF862O60290 1169 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 NDUFS3O75489 264 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 PSMB9P28065 219 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 RPL14P50914 215 aaKnown RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 ZNF235Q14590 738 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 SPANXN3Q5MJ09 141 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 STX19Q8N4C7 294 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 L3MBTL3Q96JM7 780 aaPredicted RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 NSMCE2Q96MF7 247 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 SQORQ9Y6N5 450 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 A0A096LPK6 155 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 SPDYE5A6NIY4 337 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 ZSCAN9O15535 394 aaPredicted RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 NR3C2P08235 984 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 ALOX5P09917 674 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 C6orf222P0C671 652 aaPredicted RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 XPAP23025 273 aaPredicted RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 USP46P62068 366 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 GTF2H3Q13889 308 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 UBAP2LQ14157 1087 aaKnown RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 MAPK11Q15759 364 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 CYP2R1Q6VVX0 501 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 CENPLQ8N0S6 344 aaPredicted RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 WRNIP1Q96S55 665 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 TRPC7Q9HCX4 862 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 SSU72Q9NP77 194 aaKnown RBP16.23■□□□□ 0.19
SMC4-204ENST00000462787 UBAP1Q9NZ09 502 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 ITGA11Q9UKX5 1188 aa16.23■□□□□ 0.19
SMC4-204ENST00000462787 TRIM38O00635 465 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 ENTPD3O75355 529 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 GLRA2P23416 452 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 BFSP2Q13515 415 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 ACAP1Q15027 740 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 CNPY1Q3B7I2 92 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 CEP78Q5JTW2 689 aa16.22■□□□□ 0.19
SMC4-204ENST00000462787 ABRAXAS1Q6UWZ7 409 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms