RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SLC27A1Q6PCB7 646 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SLC23A3Q6PIS1 610 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 NXPE4Q6UWF7 544 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ZPBP2Q6X784 338 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 TOGARAM2Q6ZUX3 1019 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 Q6ZVU0 165 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 CDR2LQ86X02 465 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SYT12Q8IV01 421 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ARID3BQ8IVW6 561 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ELOA2Q8IYF1 753 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 HACE1Q8IYU2 909 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF461Q8TAF7 563 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SNRNP27Q8WVK2 155 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ZBTB9Q96C00 473 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 HVCN1Q96D96 273 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SCARF2Q96GP6 870 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 GSDMAQ96QA5 445 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ACCSQ96QU6 501 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 FIZ1Q96SL8 496 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SH3GL3Q99963 347 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ADPGKQ9BRR6 497 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 TARS2Q9BW92 718 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 NUP62CLQ9H1M0 184 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ST6GALNAC4Q9H4F1 302 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 PDZD7Q9H5P4 517 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SLITRK6Q9H5Y7 841 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 TMEM206Q9H813 350 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 L2HGDHQ9H9P8 463 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 POLMQ9NP87 494 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SLC39A2Q9NP94 309 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 FSCN3Q9NQT6 498 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ADAMTS1Q9UHI8 967 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 APOBEC2Q9Y235 224 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 PCDHA5Q9Y5H7 936 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 GPC6Q9Y625 555 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 DOPEY1Q5JWR5 2465 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ABCA12Q86UK0 2595 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CREBBPQ92793 2442 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 UBE4BO95155 1302 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TRDMT1O14717 391 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 MSTNO14793 375 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 EIF3DO15371 548 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CLDN3O15551 220 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 KLF4O43474 513 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TOM1L1O75674 476 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 ABLIM3O94929 683 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 RHOBTB3O94955 611 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 KIF4AO95239 1232 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SEC24AO95486 1093 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 EGFP01133 1207 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TUBB4AP04350 444 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CFIP05156 583 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 EDN1P05305 212 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 HARSP12081 509 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TNNT1P13805 278 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 H2AFXP16104 143 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 FGFR3P22607 806 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 IDH3AP50213 366 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 GALK1P51570 392 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 GFPT1Q06210 699 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TYRO3Q06418 890 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 ELAVL2Q12926 359 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 GRIK3Q13003 919 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 STK4Q13043 487 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 DMC1Q14565 340 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 KCNB1Q14721 858 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 RBBP5Q15291 538 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 ITPRIPL2Q3MIP1 535 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 DCAF4L1Q3SXM0 396 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 COLEC12Q5KU26 742 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 EEF1DP3Q658K8 133 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SLFN12LQ6IEE8 588 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 PCSK4Q6UW60 755 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 MPZL3Q6UWV2 235 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SYT13Q7L8C5 426 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TMPRSS7Q7RTY8 843 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 MARCH9Q86YJ5 346 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 GALNT12Q8IXK2 581 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 EFCAB13Q8IY85 973 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TCEAL8Q8IYN2 117 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 ELMOD1Q8N336 334 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SDR16C5Q8N3Y7 309 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 C3orf58Q8NDZ4 430 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CCDC112Q8NEF3 446 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 KCNN1Q92952 543 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 ACO2Q99798 780 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SPON2Q9BUD6 331 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 MSTO1Q9BUK6 570 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 FGFBP2Q9BYJ0 223 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TPSD1Q9BZJ3 242 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 UBXN6Q9BZV1 441 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CLSTN2Q9H4D0 955 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SUV39H2Q9H5I1 410 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CYP4F11Q9HBI6 524 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 CBX8Q9HC52 389 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 FBRSL1Q9HCM7 1045 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 NEUROD4Q9HD90 331 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms