RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TSPAN17Q96FV3 270 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 CDK5RAP3Q96JB5 506 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 GBP4Q96PP9 640 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 ADAM2Q99965 735 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 REEP2Q9BRK0 252 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 FZD8Q9H461 694 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 RGS18Q9NS28 235 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 GIT1Q9Y2X7 761 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 ATP6V1DQ9Y5K8 247 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 COL6A3P12111 3177 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 TTC3P53804 2025 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 SPTBN5Q9NRC6 3674 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 A0A1B0GVL5 298 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 POLR2DO15514 142 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 TSPAN1O60635 241 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 ZRANB2O95218 330 aaKnown RBP eCLIP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 WNT11O96014 354 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 PFKFB1P16118 471 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 SDHBP21912 280 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 ENPP1P22413 925 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 CASP1P29466 404 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 NAMPTP43490 491 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 GATMP50440 423 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 NDUFA8P51970 172 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 PEX3P56589 373 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 HTRA4P83105 476 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 RPTNQ6XPR3 784 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 CCDC73Q6ZRK6 1079 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 CILP2Q8IUL8 1156 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 MYOCDQ8IZQ8 938 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 TMEM161BQ8NDZ6 487 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 DHX58Q96C10 678 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 ZNF689Q96CS4 500 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 CPB2Q96IY4 423 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 SCLT1Q96NL6 688 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 NTPCRQ9BSD7 190 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 FTHL17Q9BXU8 183 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 SCAND2PQ9GZW5 306 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 TTYH1Q9H313 450 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 KCND2Q9NZV8 630 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 CHMP5Q9NZZ3 219 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 ARHGAP28Q9P2N2 729 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 ASB1Q9Y576 335 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 HCFC2Q9Y5Z7 792 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 MRFAP1Q9Y605 127 aa8.75□□□□□ -1.01
ECHDC1-212ENST00000461239 A0A0U1RQF3 1178 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 FRMD3A2A2Y4 597 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 KLHL33A6NCF5 533 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 LRRIQ4A6NIV6 560 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 GOLGA6L22H0YM25 854 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 INO80B-WBP1J3KQ70 363 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 SLC16A4O15374 487 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 XPOTO43592 962 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 AMHP03971 560 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 ARF4P18085 180 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 SFPQP23246 707 aaKnown RBP eCLIP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 AOAHP28039 575 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 THBS2P35442 1172 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 STAT6P42226 847 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 SARSP49591 514 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 TFDP1Q14186 410 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 SLC9A5Q14940 896 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 NR1I3Q14994 352 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 FAM187BQ17R55 369 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 LONRF3Q496Y0 759 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 ZBTB41Q5SVQ8 909 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 NT5DC1Q5TFE4 455 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 CATSPER4Q7RTX7 472 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 CDR2LQ86X02 465 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 ECHDC2Q86YB7 292 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 MIB1Q86YT6 1006 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 PHYKPLQ8IUZ5 450 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 GRAMD1CQ8IYS0 662 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 RASSF8Q8NHQ8 419 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 ABHD4Q8TB40 342 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 KCNN1Q92952 543 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 TEKT5Q96M29 485 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 TIPINQ9BVW5 301 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 EIF2AQ9BY44 585 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 FGFBP2Q9BYJ0 223 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 INO80BQ9C086 356 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 MTIF3Q9H2K0 278 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 POFUT1Q9H488 388 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 CHST12Q9NRB3 414 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 PIN4Q9Y237 131 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 GBF1Q92538 1859 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
ECHDC1-212ENST00000461239 A0A1B0GUA9 196 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 UBA6A0AVT1 1052 aaPredicted RBP8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 DENND3A2RUS2 1198 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 GOLGA6CA6NDK9 693 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 GOLGA6BA6NDN3 693 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 EPOPA6NHQ4 379 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 NUDT19A8MXV4 375 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 ABLIM1O14639 778 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 CA3P07451 260 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 CLEC2LP0C7M8 214 aa8.73□□□□□ -1.01
ECHDC1-212ENST00000461239 GOLGA6DP0CG33 693 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms