RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 TRIP6Q15654 476 aaKnown RBP15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 SHC4Q6S5L8 630 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 FAM217AQ8IXS0 508 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 CPXM2Q8N436 756 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 RDH13Q8NBN7 331 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 DHX58Q96C10 678 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 ZNF396Q96N95 335 aaPredicted RBP15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 SLC2A11Q9BYW1 496 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 SDCBP2Q9H190 292 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 CYP3A43Q9HB55 503 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 WSB2Q9NYS7 404 aaPredicted RBP15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 THAP10Q9P2Z0 257 aaPredicted RBP15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 RALYQ9UKM9 306 aaKnown RBP15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 PCOLCE2Q9UKZ9 415 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 TMEM131Q92545 1883 aa15.33■□□□□ 0.04
DNMT3A-207ENST00000461228 CLIC2O15247 247 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 FLRT2O43155 660 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 CYP26A1O43174 497 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 STC2O76061 302 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 IRF1P10914 325 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 CCDC130P13994 396 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 NDST1P52848 882 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 MFAP3P55082 362 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 FAM193AP78312 1265 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 NFIL3Q16649 462 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 FUT11Q495W5 492 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 FYB2Q5VWT5 728 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 ATL3Q6DD88 541 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 SCARA5Q6ZMJ2 495 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 CCNI2Q6ZMN8 369 aaPredicted RBP15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 DBX2Q6ZNG2 339 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 TOGARAM2Q6ZUX3 1019 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 ANKS1BQ7Z6G8 1248 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 ACOT1Q86TX2 421 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 TTC39CQ8N584 583 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 UCMAQ8WVF2 138 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 WBP2Q969T9 261 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 ACOX2Q99424 681 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 PANK2Q9BZ23 570 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 IMPG2Q9BZV3 1241 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 DCLK3Q9C098 648 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 HMGXB4Q9UGU5 601 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
DNMT3A-207ENST00000461228 KALRNO60229 2985 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 PDXKO00764 312 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 TRIM24O15164 1050 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 BEST1O76090 585 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 KIF11P52732 1056 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 CDH8P55286 799 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 MCCD1P59942 119 aaPredicted RBP15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 COG7P83436 770 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 GPRIN1Q7Z2K8 1008 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 ARHGAP18Q8N392 663 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 NT5C1AQ9BXI3 368 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 IRX2Q9BZI1 471 aaPredicted RBP15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 PRDM16Q9HAZ2 1276 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 ITM2CQ9NQX7 267 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 OSER1Q9NX31 292 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 CACNA2D2Q9NY47 1150 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 STON1Q9Y6Q2 735 aa15.31■□□□□ 0.04
DNMT3A-207ENST00000461228 MEI4A8MW99 385 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 E9PAM4 449 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 PAPSS1O43252 624 aaPredicted RBP15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 SH3BP5O60239 455 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 NCAM1P13591 858 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 CASP4P49662 377 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 PGFP49763 221 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 RGL4Q8IZJ4 473 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 CHCHD4Q8N4Q1 142 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 KNL1Q8NG31 2342 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 C1orf216Q8TAB5 229 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 TOE1Q96GM8 510 aaKnown RBP15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 CDC6Q99741 560 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 NIF3L1Q9GZT8 377 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 MKRN2Q9H000 416 aaKnown RBP15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 FSCN3Q9NQT6 498 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 PCDHB9Q9Y5E1 797 aa15.3■□□□□ 0.04
DNMT3A-207ENST00000461228 CILPO75339 1184 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 LATS1O95835 1130 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 RALAP11233 206 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 RARGP13631 454 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 HOXB3P14651 431 aaPredicted RBP15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 PIK3CAP42336 1068 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 MATKP42679 507 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 TPMTP51580 245 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 ZBTB16Q05516 673 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 SCAPQ12770 1279 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 ORC1Q13415 861 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 RESP18Q5W5W9 173 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 KIAA1324Q6UXG2 1013 aaKnown RBP15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 SV2AQ7L0J3 742 aa15.29■□□□□ 0.04
DNMT3A-207ENST00000461228 UBXN6Q9BZV1 441 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms