RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 FHL3Q13643 280 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CCNIQ14094 377 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 PTPAQ15257 358 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 LY6G5CQ5SRR4 150 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 FAM205BPQ63HN1 556 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 DGAT2L7PQ6IED9 249 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 MSANTD2Q6P1R3 559 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.31□□□□□ -1.88
HPS3-203ENST00000460822 ADAMTS15Q8TE58 950 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 TBC1D22AQ8WUA7 517 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 LARP4BQ92615 738 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 STAMQ92783 540 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 RNF125Q96EQ8 232 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 ZDHHC12Q96GR4 267 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 NUDT22Q9BRQ3 303 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 MECRQ9BV79 373 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 REXO4Q9GZR2 422 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 HSF4Q9ULV5 492 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 GPR34Q9UPC5 381 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 USP22Q9UPT9 525 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CNPY2Q9Y2B0 182 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A20PA6NIJ5 464 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 LEFTY2O00292 366 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 TRIM24O15164 1050 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 ORC4O43929 436 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 CBFA2T3O75081 653 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 TIPRLO75663 272 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 CSF1P09603 554 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 KCNA2P16389 499 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 PPIFP30405 207 aaKnown RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 PRKAR1BP31321 381 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 UQCRC1P31930 480 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 HTR7P34969 479 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 MCM2P49736 904 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 GATMP50440 423 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 NAP1L1P55209 391 aaKnown RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 INHBEP58166 350 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 ERV3-1Q14264 604 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 GPR68Q15743 365 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 CCNG2Q16589 344 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 PREPLQ4J6C6 727 aaPredicted RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 TIGD2Q4W5G0 525 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 ZNF484Q5JVG2 852 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 METTL24Q5JXM2 366 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 KCNV1Q6PIU1 500 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 CLEC9AQ6UXN8 241 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 R3HCC1LQ7Z5L2 792 aaKnown RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 KRT77Q7Z794 578 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 TRABD2AQ86V40 505 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 RHOT2Q8IXI1 618 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 USP38Q8NB14 1042 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 OR56A1Q8NGH5 318 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 RSRC1Q96IZ7 334 aaKnown RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 TREX2Q9BQ50 279 aaPredicted RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 ZSWIM1Q9BR11 485 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 SDF4Q9BRK5 362 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 ZCWPW1Q9H0M4 648 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 IKZF4Q9H2S9 585 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 PRKRIP1Q9H875 184 aaPredicted RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 RMI1Q9H9A7 625 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 LIN7CQ9NUP9 197 aaKnown RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 SERTAD3Q9UJW9 196 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 USP15Q9Y4E8 981 aaPredicted RBP3.3□□□□□ -1.88
HPS3-203ENST00000460822 SNX14Q9Y5W7 946 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 CYP46A1Q9Y6A2 500 aa3.3□□□□□ -1.88
HPS3-203ENST00000460822 PI4KAP2A4QPH2 592 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 AHCYL1O43865 530 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 DOK2O60496 412 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 TMCC2O75069 709 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 PPFIA2O75334 1257 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 FGFR4P22455 802 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 PGM1P36871 562 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 RAD52P43351 418 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 NDUFV1P49821 464 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 CLNS1AP54105 237 aaKnown RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 DRG2P55039 364 aaKnown RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 SLC25A3Q00325 362 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 NHLH2Q02577 135 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 RNASELQ05823 741 aaKnown RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 E2F2Q14209 437 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 SMN1Q16637 294 aaKnown RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 RBM20Q5T481 1227 aaKnown RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 FAM102AQ5T9C2 384 aaPredicted RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 DEPDC1Q5TB30 811 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 METRNLQ641Q3 311 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 NAIF1Q69YI7 327 aaPredicted RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 PIK3AP1Q6ZUJ8 805 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 HTR3DQ70Z44 454 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 BRINP3Q76B58 766 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 B4GALNT4Q76KP1 1039 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 RASGRP2Q7LDG7 609 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 TMPRSS9Q7Z410 1059 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.29□□□□□ -1.88
HPS3-203ENST00000460822 GALNT5Q7Z7M9 940 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 ARMC8Q8IUR7 673 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 ULK2Q8IYT8 1036 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 C11orf44Q8N8P7 122 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 SUN3Q8TAQ9 357 aa3.29□□□□□ -1.88
HPS3-203ENST00000460822 PROKR1Q8TCW9 393 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms