RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ARCQ7LC44 396 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 MCOLN2Q8IZK6 566 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 TC2NQ8N9U0 490 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 PIWIL1Q96J94 861 aaKnown RBP23.46■■□□□ 1.35
C9orf3-209ENST00000460573 LRRC3BQ96PB8 259 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 SLC2A13Q96QE2 648 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 GRPEL1Q9HAV7 217 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 TRPV5Q9NQA5 729 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 SLC2A4RGQ9NR83 387 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 TMEM51Q9NW97 253 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 RRN3Q9NYV6 651 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 SH3BP1Q9Y3L3 701 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 HBS1LQ9Y450 684 aaKnown RBP23.46■■□□□ 1.35
C9orf3-209ENST00000460573 GOLGA6L6A8MZA4 724 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 SLC9A3R1O14745 358 aaPredicted RBP23.45■■□□□ 1.34
C9orf3-209ENST00000460573 ZNF263O14978 683 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 DAB1O75553 588 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 PLEKP08567 350 aaPredicted RBP23.45■■□□□ 1.34
C9orf3-209ENST00000460573 AOC1P19801 751 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 PFKPQ01813 784 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 GRM2Q14416 872 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 MIB1Q86YT6 1006 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 TRIM11Q96F44 468 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 ISCUQ9H1K1 167 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 BRD9Q9H8M2 597 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 GKN1Q9NS71 199 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 CFAP97Q9P2B7 532 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 TBC1D14Q9P2M4 693 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 NAALADL1Q9UQQ1 740 aa23.45■■□□□ 1.34
C9orf3-209ENST00000460573 HELZP42694 1942 aaKnown RBP23.45■■□□□ 1.34
C9orf3-209ENST00000460573 MDM4O15151 490 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 GDI1P31150 447 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 NOS2P35228 1153 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 EIF4A3P38919 411 aaKnown RBP23.44■■□□□ 1.34
C9orf3-209ENST00000460573 NNTQ13423 1086 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 PDGFRLQ15198 375 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 TAF5Q15542 800 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 C2CD6Q53TS8 623 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 DCAF6Q58WW2 860 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 CWF19L1Q69YN2 538 aaKnown RBP23.44■■□□□ 1.34
C9orf3-209ENST00000460573 HTR3DQ70Z44 454 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 DEFB106AQ8N104 65 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 OSCP1Q8WVF1 389 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 DNASE1L2Q92874 299 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 PLD4Q96BZ4 506 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 OTUB2Q96DC9 234 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 SERPINB11Q96P15 392 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 PANX2Q96RD6 677 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 DCLK3Q9C098 648 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 DEF6Q9H4E7 631 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 TBC1D17Q9HA65 648 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 ARHGEF3Q9NR81 526 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 TAS2R14Q9NYV8 317 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 LSM7Q9UK45 103 aaKnown RBP23.44■■□□□ 1.34
C9orf3-209ENST00000460573 ZNF510Q9Y2H8 683 aa23.44■■□□□ 1.34
C9orf3-209ENST00000460573 SLC12A8A0AV02 714 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 TMCO5BA8MYB1 307 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 GOLGA8SH3BPF8 625 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 GRAP2O75791 330 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 FTLP02792 175 aaPredicted RBP23.43■■□□□ 1.34
C9orf3-209ENST00000460573 MATKP42679 507 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 GPC5P78333 572 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 GSE1Q14687 1217 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 SYPL2Q5VXT5 272 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 C3orf20Q8ND61 904 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 DQX1Q8TE96 717 aaKnown RBP23.43■■□□□ 1.34
C9orf3-209ENST00000460573 SHDQ96IW2 340 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 CCDC42Q96M95 316 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 PHOX2BQ99453 314 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 FAM83CQ9BQN1 747 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.43■■□□□ 1.34
C9orf3-209ENST00000460573 SFMBT1Q9UHJ3 866 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 TMEM59LQ9UK28 342 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 STAP1Q9ULZ2 295 aa23.43■■□□□ 1.34
C9orf3-209ENST00000460573 A0A087X0T9 212 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 FAM170AA1A519 330 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 FAM228BP0C875 321 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 MYBL1P10243 752 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 GBP1P32455 592 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 TRIP4Q15650 581 aaPredicted RBP23.42■■□□□ 1.34
C9orf3-209ENST00000460573 SLC18A3Q16572 532 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 ASTE1Q2TB18 679 aaPredicted RBP23.42■■□□□ 1.34
C9orf3-209ENST00000460573 ALKBH5Q6P6C2 394 aaKnown RBP23.42■■□□□ 1.34
C9orf3-209ENST00000460573 TTC16Q8NEE8 873 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 RIN3Q8TB24 985 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 SELENOOQ9BVL4 669 aa23.42■■□□□ 1.34
C9orf3-209ENST00000460573 DUS2Q9NX74 493 aaKnown RBP23.42■■□□□ 1.34
C9orf3-209ENST00000460573 KRBA1A5PL33 1030 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 SIGLEC16A6NMB1 481 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 AKR1B10O60218 316 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 STC2O76061 302 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 KRT3P12035 628 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 IFNAR2P48551 515 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 RNASE9P60153 205 aaKnown RBP23.41■■□□□ 1.34
C9orf3-209ENST00000460573 RING1Q06587 406 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 UNC45BQ8IWX7 931 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 CSGALNACT1Q8TDX6 532 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 CHP1Q99653 195 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 DDX23Q9BUQ8 820 aaKnown RBP23.41■■□□□ 1.34
C9orf3-209ENST00000460573 NHEJ1Q9H9Q4 299 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms