RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NDUFV2P19404 249 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 GCLMP48507 274 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 MCCD1P59942 119 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-220ENST00000458038 METTL3Q86U44 580 aaKnown RBP22.64■■□□□ 1.21
CPNE1-220ENST00000458038 FAM186BQ8IYM0 893 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 ARHGAP18Q8N392 663 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 ZNF419Q96HQ0 510 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-220ENST00000458038 TWNKQ96RR1 684 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 ACOX2Q99424 681 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 SCNM1Q9BWG6 230 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 UBXN6Q9BZV1 441 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 NMUR1Q9HB89 426 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 APOBEC3GQ9HC16 384 aaKnown RBP22.64■■□□□ 1.21
CPNE1-220ENST00000458038 SUSD2Q9UGT4 822 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 AKAP13Q12802 2813 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 ATXN2Q99700 1313 aaKnown RBP22.63■■□□□ 1.21
CPNE1-220ENST00000458038 C1QTNF9BB2RNN3 333 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 H0Y626 953 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 ARHGAP33O14559 1287 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 TRIM16O95361 564 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 C1QTNF9P0C862 333 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 SYKP43405 635 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 STARD3Q14849 445 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 TOGARAM2Q6ZUX3 1019 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 GUF1Q8N442 669 aaKnown RBP22.63■■□□□ 1.21
CPNE1-220ENST00000458038 TAS1R2Q8TE23 839 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 JAKMIP2Q96AA8 810 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 MRGPRX1Q96LB2 322 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 TMEM8AQ9HCN3 771 aa22.63■■□□□ 1.21
CPNE1-220ENST00000458038 FAM237AA0A1B0GTK4 181 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 PENKP01210 267 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-220ENST00000458038 GNSP15586 552 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 CD58P19256 250 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 PPP3CAQ08209 521 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 SLC14A1Q13336 389 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 ADAM9Q13443 819 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 KIAA1211LQ6NV74 962 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 SCD5Q86SK9 330 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 TRIML1Q8N9V2 468 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 UCMAQ8WVF2 138 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 SPATA32Q96LK8 384 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 HSPA12BQ96MM6 686 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 GTPBP2Q9BX10 602 aaKnown RBP22.62■■□□□ 1.21
CPNE1-220ENST00000458038 CYP8B1Q9UNU6 501 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 NFE2L3Q9Y4A8 694 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 NEUROG3Q9Y4Z2 214 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 CACNA1GO43497 2377 aa22.62■■□□□ 1.21
CPNE1-220ENST00000458038 PCDH15Q96QU1 1955 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 SLC8A3P57103 927 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 KRT85P78386 507 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 PKP1Q13835 747 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 WDR45BQ5MNZ6 344 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 PPP1R26Q5T8A7 1209 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-220ENST00000458038 KRT39Q6A163 491 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 SLC41A1Q8IVJ1 513 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 DEFB119Q8N690 84 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 HEXIM2Q96MH2 286 aaKnown RBP22.61■■□□□ 1.21
CPNE1-220ENST00000458038 DNAAF2Q9NVR5 837 aaKnown RBP22.61■■□□□ 1.21
CPNE1-220ENST00000458038 CACNA2D2Q9NY47 1150 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 NUDT5Q9UKK9 219 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 ZMIZ1Q9ULJ6 1067 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 STRIP2Q9ULQ0 834 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 ASPMQ8IZT6 3477 aa22.61■■□□□ 1.21
CPNE1-220ENST00000458038 DMXL2Q8TDJ6 3036 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 MDM4O15151 490 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 STX10O60499 249 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 CYBBP04839 570 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 TRIM49P0CI25 452 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 TRIM49CP0CI26 452 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 SIM1P81133 766 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-220ENST00000458038 MINDY1Q8N5J2 469 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 GATA6Q92908 595 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 TMEM121BQ9BXQ6 578 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-220ENST00000458038 SLC2A11Q9BYW1 496 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 ZDHHC5Q9C0B5 715 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 PLK2Q9NYY3 685 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 STON1Q9Y6Q2 735 aa22.6■■□□□ 1.21
CPNE1-220ENST00000458038 KLKB1P03952 638 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 SPINK2P20155 84 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 CD6P30203 668 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 DPYDQ12882 1025 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 ENPP2Q13822 863 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 EDRF1Q3B7T1 1238 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 FYB2Q5VWT5 728 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 RGL4Q8IZJ4 473 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 FBXL13Q8NEE6 735 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 BHMTQ93088 406 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 CCDC34Q96HJ3 373 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 PRDM16Q9HAZ2 1276 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 THAP10Q9P2Z0 257 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-220ENST00000458038 MSRB2Q9Y3D2 182 aa22.59■■□□□ 1.21
CPNE1-220ENST00000458038 TIMM44O43615 452 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 OXTRP30559 389 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 CORO1AP31146 461 aaKnown RBP22.58■■□□□ 1.21
CPNE1-220ENST00000458038 NDUFA8P51970 172 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 MFAP3P55082 362 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 EIF4HQ15056 248 aaKnown RBP22.58■■□□□ 1.21
CPNE1-220ENST00000458038 ZNF423Q2M1K9 1284 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 PLEKHG6Q3KR16 790 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 KIAA1324Q6UXG2 1013 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms