RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.97■□□□□ 0.31
MBD1-210ENST00000457839 STAP1Q9ULZ2 295 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 NOVA2Q9UNW9 492 aaKnown RBP16.97■□□□□ 0.31
MBD1-210ENST00000457839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.97■□□□□ 0.31
MBD1-210ENST00000457839 FAM72CH0Y354 149 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 FBXO21O94952 628 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 UPP2O95045 317 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 RBL1P28749 1068 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 RDXP35241 583 aaKnown RBP16.97■□□□□ 0.31
MBD1-210ENST00000457839 CAV1Q03135 178 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 FAM72AQ5TYM5 149 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 FAM72DQ6L9T8 149 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 CAPN12Q6ZSI9 719 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 TMEM173Q86WV6 379 aaPredicted RBP16.97■□□□□ 0.31
MBD1-210ENST00000457839 FAM72BQ86X60 149 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 SCN4BQ8IWT1 228 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
MBD1-210ENST00000457839 DDIT4Q9NX09 232 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 KANSL3Q9P2N6 904 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 LRFN2Q9ULH4 789 aa16.97■□□□□ 0.31
MBD1-210ENST00000457839 KCNN4O15554 427 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 TYMPP19971 482 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 GPR15P49685 360 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 LONRF1Q17RB8 773 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 FAM171A1Q5VUB5 890 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 BSPRYQ5W0U4 402 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 BBOF1Q8ND07 529 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 CCHCR1Q8TD31 782 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 CPT1BQ92523 772 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 SEPT8Q92599 483 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 FAM129AQ9BZQ8 928 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 NINJ2Q9NZG7 142 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 NUDT5Q9UKK9 219 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 ARPP19P56211 112 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 BASP1P80723 227 aaKnown RBP16.96■□□□□ 0.31
MBD1-210ENST00000457839 TLE2Q04725 743 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 TRIM60Q495X7 471 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 ZNF771Q7L3S4 317 aaPredicted RBP16.96■□□□□ 0.31
MBD1-210ENST00000457839 BNIPLQ7Z465 357 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 ZCCHC9Q8N567 271 aaKnown RBP16.96■□□□□ 0.31
MBD1-210ENST00000457839 TTC9BQ8N6N2 239 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 GPR152Q8TDT2 470 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 USP29Q9HBJ7 922 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 WDR6Q9NNW5 1121 aaKnown RBP16.96■□□□□ 0.31
MBD1-210ENST00000457839 SAYSD1Q9NPB0 183 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.96■□□□□ 0.31
MBD1-210ENST00000457839 SNX10Q9Y5X0 201 aa16.96■□□□□ 0.31
MBD1-210ENST00000457839 ZNF638Q14966 1978 aaKnown RBP16.96■□□□□ 0.31
MBD1-210ENST00000457839 KIAA0100Q14667 2235 aaKnown RBP16.96■□□□□ 0.3
MBD1-210ENST00000457839 ERICH4A6NGS2 130 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 TTC4O95801 387 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 CAPN2P17655 700 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 MNX1P50219 401 aaPredicted RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 DDR2Q16832 855 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 VARS2Q5ST30 1063 aaKnown RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 FAXCQ5TGI0 409 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 PRCCQ92733 491 aaPredicted RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 NCAPGQ9BPX3 1015 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 FRMD8P1Q9BZ68 369 aaPredicted RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 ADAM28Q9UKQ2 775 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 FOXO6A8MYZ6 492 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 SOAT2O75908 522 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 NR1D1P20393 614 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 SLC11A1P49279 550 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 SLC5A3P53794 718 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 MAGOHP61326 146 aaKnown RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 SLC39A5Q6ZMH5 540 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 TRMT10CQ7L0Y3 403 aaKnown RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 TP53INP2Q8IXH6 220 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 ATAD1Q8NBU5 361 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 RABEP2Q9H5N1 569 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
MBD1-210ENST00000457839 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
MBD1-210ENST00000457839 TBKBP1A7MCY6 615 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 HMGB1P1B2RPK0 211 aaPredicted RBP16.94■□□□□ 0.3
MBD1-210ENST00000457839 TMEM63AO94886 807 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 TGM2P21980 687 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 ARL4AP40617 200 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 MAGEA4P43358 317 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 EIF3BP55884 814 aaKnown RBP16.94■□□□□ 0.3
MBD1-210ENST00000457839 IFI35P80217 286 aaPredicted RBP16.94■□□□□ 0.3
MBD1-210ENST00000457839 NCBP2-AS2Q69YL0 99 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 RNF139Q8WU17 664 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 ARHGEF4Q9NR80 690 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 DTLQ9NZJ0 730 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 FARP1Q9Y4F1 1045 aaPredicted RBP16.94■□□□□ 0.3
MBD1-210ENST00000457839 OAZ2O95190 189 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 ADRA1BP35368 520 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 MORF4L2Q15014 288 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 MAPRE1Q15691 268 aaKnown RBP16.94■□□□□ 0.3
MBD1-210ENST00000457839 MSS51Q4VC12 460 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 PM20D1Q6GTS8 502 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 KCNT2Q6UVM3 1135 aa16.94■□□□□ 0.3
MBD1-210ENST00000457839 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms