RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 HLTFQ14527 1009 aaKnown RBP eCLIP4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 RABEP1Q15276 862 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 SAFBQ15424 915 aaKnown RBP eCLIP4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 TMTC4Q5T4D3 741 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 FAXCQ5TGI0 409 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 KLHDC7AQ5VTJ3 777 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 GRHL2Q6ISB3 625 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 USP17L6PQ6QN14 398 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 CRTC1Q6UUV9 634 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 TECPR1Q7Z6L1 1165 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 MRPL10Q7Z7H8 261 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 CCAR1Q8IX12 1150 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 NANOGP1Q8N7R0 232 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 HMCESQ96FZ2 354 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 SPRTNQ9H040 489 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 FAM50BQ9Y247 325 aa4.28□□□□□ -1.72
R3HDM1-212ENST00000456040 SPATA31A1Q5TZJ5 1347 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 A0A087WZ62 844 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 MYMKA6NI61 221 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 PRR23D1E9PI22 279 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 KCNQ3O43525 872 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 PRAMEF2O60811 474 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 PRR23D2P0DMB1 279 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 SLC5A1P13866 664 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 TSHRP16473 764 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 TACR3P29371 465 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 PRIM2P49643 509 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 JAK3P52333 1124 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 FHL3Q13643 280 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 LAMB3Q13751 1172 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 SEC23BQ15437 767 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 FAM110CQ1W6H9 321 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 AWAT2Q6E213 333 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 MRNIPQ6NTE8 343 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 SHC4Q6S5L8 630 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 KRT73Q86Y46 540 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 RNF152Q8N8N0 203 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 COQ8BQ96D53 544 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 SNX27Q96L92 541 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 SIGLEC11Q96RL6 698 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 EIF2AQ9BY44 585 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 AS3MTQ9HBK9 375 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 VPS45Q9NRW7 570 aa4.27□□□□□ -1.73
R3HDM1-212ENST00000456040 A0A1W2PPC4 97 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 APOL1O14791 398 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 TRIM27P14373 513 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 SLC5A2P31639 672 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 GALNSP34059 522 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 PBX1P40424 430 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 NR4A2P43354 598 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 WDR5P61964 334 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 HSF1Q00613 529 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 ID2Q02363 134 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 ZNF91Q05481 1191 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 KCNJ12Q14500 433 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 ABLIM2Q6H8Q1 611 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 C11orf96Q7Z7L8 435 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 CCDC28AQ8IWP9 274 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 SMRP1Q8NCR6 262 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 CCDC136Q96JN2 1154 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 WDR24Q96S15 920 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 TBCBQ99426 244 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 NUAK2Q9H093 628 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 SAP30LQ9HAJ7 183 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 STARD7Q9NQZ5 370 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 ARL8BQ9NVJ2 186 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 SEMA5BQ9P283 1151 aa4.26□□□□□ -1.73
R3HDM1-212ENST00000456040 SOCS2O14508 198 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 ADAM10O14672 748 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 APAF1O14727 1248 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 ZSCAN9O15535 394 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 TMEM191BP0C7N4 346 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 ARP10275 920 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 MST1P26927 711 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 RPS13P62277 151 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 YPEL5P62699 121 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 CFHR1Q03591 330 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 KPNB1Q14974 876 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 RBMS2Q15434 407 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 ZNF260Q3ZCT1 412 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 MIDNQ504T8 468 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 TLDC1Q6P9B6 456 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 DEF8Q6ZN54 512 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 KIAA0408Q6ZU52 694 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 UBE2Q1Q7Z7E8 422 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 SAMD14Q8IZD0 417 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 PJA1Q8NG27 643 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 PRR11Q96HE9 360 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 GJB4Q9NTQ9 266 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 GEMIN8Q9NWZ8 242 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 MTMR4Q9NYA4 1195 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 AFG3L2Q9Y4W6 797 aa4.25□□□□□ -1.73
R3HDM1-212ENST00000456040 TTC34A8MYJ7 566 aa4.24□□□□□ -1.73
R3HDM1-212ENST00000456040 PMM2O15305 246 aa4.24□□□□□ -1.73
R3HDM1-212ENST00000456040 INPPL1O15357 1258 aa4.24□□□□□ -1.73
R3HDM1-212ENST00000456040 CBFA2T3O75081 653 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms