RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 HAUS5O94927 633 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 CD4P01730 458 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 PYGBP11216 843 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 CALB2P22676 271 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 CRHR1P34998 444 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 GJA5P36382 358 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 PNPLA4P41247 253 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 ARFIP2P53365 341 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 NRLP54845 237 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 ACCSLQ4AC99 568 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 C9orf57Q5W0N0 161 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 UNC5AQ6ZN44 842 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 ACOT1Q86TX2 421 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 C12orf29Q8N999 325 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 RFWD2Q8NHY2 731 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 TBC1D31Q96DN5 1066 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 MRRFQ96E11 262 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 FAM111AQ96PZ2 611 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 KCNK4Q9NYG8 393 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 STK38LQ9Y2H1 464 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 TSC2P49815 1807 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 MBLAC1A4D2B0 266 aaPredicted RBP12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 NPTXRO95502 500 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 MMP3P08254 477 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 KCNE1P15382 129 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 ADORA2AP29274 412 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 RGS7P49802 495 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 SARNPP82979 210 aaKnown RBP12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 FRG1Q14331 258 aaKnown RBP12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 CDO1Q16878 200 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 NOTUMQ6P988 496 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 MTDHQ86UE4 582 aaKnown RBP12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 NSMCE1Q8WV22 266 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 NT5C3BQ969T7 300 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 NSL1Q96IY1 281 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 ZNF560Q96MR9 790 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 CSPG4P5Q96PW8 444 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 SIKE1Q9BRV8 207 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 CXorf56Q9H5V9 222 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 SMYD2Q9NRG4 433 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 AP4E1Q9UPM8 1137 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 L3MBTL1Q9Y468 752 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 SNX9Q9Y5X1 595 aa12.96□□□□□ -0.33
ECHDC1-209ENST00000454591 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.34
ECHDC1-209ENST00000454591 A6NJR5 290 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 CXorf49A8MYA2 514 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 GOLGA8RI6L899 631 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 LIN7AO14910 233 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 SNNO75324 88 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 AVILO75366 819 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 GRAP2O75791 330 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 ZNF286BP0CG31 522 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 MRPS5P82675 430 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 OCRLQ01968 901 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 SLC10A2Q12908 348 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 TEX44Q53QW1 395 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 NCBP2-AS2Q69YL0 99 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 IQSEC1Q6DN90 963 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 SCYL2Q6P3W7 929 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 DPH6Q7L8W6 267 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 PPM1NQ8N819 430 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 KBTBD7Q8WVZ9 684 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 KLF6Q99612 283 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 BTBD10Q9BSF8 475 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 NAT9Q9BTE0 207 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 TMEM120AQ9BXJ8 343 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 HEY2Q9UBP5 337 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 LRRC42Q9Y546 428 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 NUMBLQ9Y6R0 609 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 SCN4AP35499 1836 aa12.95□□□□□ -0.34
ECHDC1-209ENST00000454591 A0A0A0MRY4 1105 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 PPEF2O14830 753 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 XPO1O14980 1071 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 DAB1O75553 588 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 CBX6O95503 412 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 METTL18O95568 372 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 APRTP07741 180 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 TPBGLP0DKB5 382 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 BGNP21810 368 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 ADCYAP1R1P41586 468 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 MATKP42679 507 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms