RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 TRIM24O15164 1050 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 ADAM23O75077 832 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 PENKP01210 267 aaPredicted RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 CORO1AP31146 461 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 TIE1P35590 1138 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 DAOAP59103 153 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 FOXK2Q01167 660 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 PUM1Q14671 1186 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP40-210ENST00000454354 TRIP4Q15650 581 aaPredicted RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 PLK5Q496M5 336 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 EMC10Q5UCC4 262 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 PMF1Q6P1K2 205 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 TPGS1Q6ZTW0 290 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 NUDT18Q6ZVK8 323 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 TRMT11Q7Z4G4 463 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 IRF2BP1Q8IU81 584 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 CPXM2Q8N436 756 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 CCDC33Q8N5R6 958 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 MDGA1Q8NFP4 955 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 IRGQQ8WZA9 623 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 NDRG1Q92597 394 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 HSFY1Q96LI6 401 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 DUSP15Q9H1R2 295 aaPredicted RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 ABCC13Q9NSE7 274 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 SEMA4GQ9NTN9 838 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 HCN2Q9UL51 889 aa12.61□□□□□ -0.39
USP40-210ENST00000454354 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
USP40-210ENST00000454354 SLC12A8A0AV02 714 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 GTPBP10A4D1E9 387 aaKnown RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 YJEFN3A6XGL0 299 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 E7ENQ6 273 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 GABBR2O75899 941 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 ALDH1A2O94788 518 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 CISD3P0C7P0 127 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 SDHBP21912 280 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 CHKAP35790 457 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 RPL34P49207 117 aaKnown RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 DGKGP49619 791 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 RSPO4Q2I0M5 234 aaPredicted RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 BSPRYQ5W0U4 402 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 ANO7Q6IWH7 933 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 PRR23CQ6ZRP0 262 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 ENOSF1Q7L5Y1 443 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 C11orf74Q86VG3 221 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 OLIG1Q8TAK6 271 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 FAM81BQ96LP2 452 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 SLC27A6Q9Y2P4 619 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 HBS1LQ9Y450 684 aaKnown RBP12.6□□□□□ -0.39
USP40-210ENST00000454354 PCDHGA5Q9Y5G8 931 aa12.6□□□□□ -0.39
USP40-210ENST00000454354 FBXO21O94952 628 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 LATS1O95835 1130 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 CALCAP01258 141 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 HMBSP08397 361 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 LCP1P13796 627 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 GPD2P43304 727 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 RGS7P49802 495 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 USP39Q53GS9 565 aaKnown RBP12.59□□□□□ -0.39
USP40-210ENST00000454354 PLA2G2CQ5R387 149 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 DENND1CQ8IV53 801 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 UBE2TQ9NPD8 197 aaPredicted RBP12.59□□□□□ -0.39
USP40-210ENST00000454354 ZDHHC4Q9NPG8 344 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.59□□□□□ -0.39
USP40-210ENST00000454354 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
USP40-210ENST00000454354 PRRT4C9JH25 899 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 GFRA2O00451 464 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 DCLK1O15075 740 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 RHOBTB1O94844 696 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 LTFP02788 710 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 ZNF806P0C7X5 589 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
USP40-210ENST00000454354 NTSR1P30989 418 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 MFAP3P55082 362 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 ELF2Q15723 593 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 EGFLAMQ63HQ2 1017 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 GBP6Q6ZN66 633 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 NETO1Q8TDF5 533 aa12.58□□□□□ -0.4
USP40-210ENST00000454354 CLEC4CQ8WTT0 213 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms