RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ERMP1Q7Z2K6 904 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 C11orf74Q86VG3 221 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 RASSF3Q86WH2 238 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 DENND1CQ8IV53 801 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 FAM114A1Q8IWE2 563 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 SLC35F5Q8WV83 523 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 IRGQQ8WZA9 623 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 NDRG1Q92597 394 aaKnown RBP11.18□□□□□ -0.62
DDX39A-203ENST00000454233 EDEM1Q92611 657 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 BHMTQ93088 406 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 HSFY1Q96LI6 401 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 KREMEN1Q96MU8 473 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 CRACR2AQ9BSW2 395 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 TPSD1Q9BZJ3 242 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 PARD6AQ9NPB6 346 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 SEMA4GQ9NTN9 838 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 BCCIPQ9P287 314 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX39A-203ENST00000454233 CDV3Q9UKY7 258 aaKnown RBP11.18□□□□□ -0.62
DDX39A-203ENST00000454233 HBS1LQ9Y450 684 aaKnown RBP11.18□□□□□ -0.62
DDX39A-203ENST00000454233 CFAP54Q96N23 3096 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 MYO15AQ9UKN7 3530 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 YJEFN3A6XGL0 299 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 E7ENQ6 273 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 TRIM24O15164 1050 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-203ENST00000454233 MED7O43513 233 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 FBXO21O94952 628 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 EPN2O95208 641 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 KLKB1P03952 638 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 TGM1P22735 817 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 NTSR1P30989 418 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 ZNF132P52740 706 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 FOXK2Q01167 660 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-203ENST00000454233 EXOC3L4Q17RC7 722 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 RSPO4Q2I0M5 234 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-203ENST00000454233 PLK5Q496M5 336 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 FMNL3Q8IVF7 1028 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 PGBD3Q8N328 593 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 CPXM2Q8N436 756 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 ZC3H10Q96K80 434 aaKnown RBP11.17□□□□□ -0.62
DDX39A-203ENST00000454233 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 THAP9Q9H5L6 903 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 ZDHHC4Q9NPG8 344 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 PLK2Q9NYY3 685 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 AGO1Q9UL18 857 aaKnown RBP11.17□□□□□ -0.62
DDX39A-203ENST00000454233 CNTN6Q9UQ52 1028 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 STARD13Q9Y3M8 1113 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 PCDHGA5Q9Y5G8 931 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 SPAG17Q6Q759 2223 aa11.17□□□□□ -0.62
DDX39A-203ENST00000454233 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 TCRBV21S2A2A0A5A6 115 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 GTPBP10A4D1E9 387 aaKnown RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 PIK3R2O00459 728 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 DCLK1O15075 740 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 SART1O43290 800 aaKnown RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 THAP12O43422 761 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 ADAM23O75077 832 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 LETM1O95202 739 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 PENKP01210 267 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 CALCAP01258 141 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 LTFP02788 710 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 ERCC5P28715 1186 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 USP8P40818 1118 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 ACADSBP45954 432 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 BYSLQ13895 437 aaKnown RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 MEA1Q16626 185 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 ARHGAP44Q17R89 818 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 CLEC17AQ6ZS10 378 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 TOGARAM2Q6ZUX3 1019 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 DGLUCYQ7Z3D6 616 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 MDGA1Q8NFP4 955 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 DDI1Q8WTU0 396 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 HMGB4Q8WW32 186 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 SPACA7Q96KW9 195 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 MED15Q96RN5 788 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 MIS12Q9H081 205 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 DUSP15Q9H1R2 295 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 DLL3Q9NYJ7 618 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 APEX2Q9UBZ4 518 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 INVSQ9Y283 1065 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.16□□□□□ -0.62
DDX39A-203ENST00000454233 RALGAPA1Q6GYQ0 2036 aa11.16□□□□□ -0.62
DDX39A-203ENST00000454233 MYO18AQ92614 2054 aaKnown RBP11.15□□□□□ -0.62
DDX39A-203ENST00000454233 LATS1O95835 1130 aa11.15□□□□□ -0.62
DDX39A-203ENST00000454233 CISD3P0C7P0 127 aa11.15□□□□□ -0.62
DDX39A-203ENST00000454233 HOXB2P14652 356 aa11.15□□□□□ -0.62
DDX39A-203ENST00000454233 HNRNPLP14866 589 aaKnown RBP eCLIP11.15□□□□□ -0.62
DDX39A-203ENST00000454233 SLC9A1P19634 815 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms