RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ZNF410Q86VK4 478 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 ERC1Q8IUD2 1116 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 KSR1Q8IVT5 923 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 ZCCHC9Q8N567 271 aaKnown RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 KBTBD3Q8NAB2 608 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 USP13Q92995 863 aaPredicted RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 TMEM87BQ96K49 555 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 MMS19Q96T76 1030 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 FUCA2Q9BTY2 467 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 SRRTQ9BXP5 876 aaKnown RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 INO80BQ9C086 356 aaPredicted RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CXCL16Q9H2A7 254 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 TMEM245Q9H330 911 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 RIOX1Q9H6W3 641 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 POLR1BQ9H9Y6 1135 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CD93Q9NPY3 652 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 REV1Q9UBZ9 1251 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 MAFFQ9ULX9 164 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CEP131Q9UPN4 1083 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 KMT2CQ8NEZ4 4911 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 A0A1W2PQF6 199 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 TCRBV21S2A2A0A5A6 115 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CDRT15L2A8MXV6 281 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 KLRF2D3W0D1 207 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 H0Y8X5 98 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 DHX16O60231 1041 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 SYNCRIPO60506 623 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 KLF8O95600 359 aaPredicted RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 MT-CO3P00414 261 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CCNFP41002 786 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 NASPP49321 788 aaPredicted RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CSNK1EP49674 416 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 ASIC1P78348 528 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CLCQ05315 142 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 ST3GAL1Q11201 340 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 GRIK3Q13003 919 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 SRSF6Q13247 344 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 TUSC3Q13454 348 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 SLBPQ14493 270 aaKnown RBP eCLIP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 PDGFRLQ15198 375 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 ALX1Q15699 326 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 HSF5Q4G112 596 aaPredicted RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 GPR158Q5T848 1215 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 ANKS3Q6ZW76 656 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 USP53Q70EK8 1073 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CATIPQ7Z7H3 387 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 SLFN12Q8IYM2 578 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 ENGASEQ8NFI3 743 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 BEST2Q8NFU1 509 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CPLX3Q8WVH0 158 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 IGSF8Q969P0 613 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 EXOC4Q96A65 974 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 COX4I2Q96KJ9 171 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 CNDP2Q96KP4 475 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 PIGSQ96S52 555 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 MXRA8Q9BRK3 442 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 SDF4Q9BRK5 362 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 UNKQ9C0B0 810 aaKnown RBP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 ADNPQ9H2P0 1102 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 TASP1Q9H6P5 420 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 C7orf69Q9H7B7 122 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 THSD1Q9NS62 852 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 BCCIPQ9P287 314 aaKnown RBP eCLIP5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 TJP2Q9UDY2 1190 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 MAD2L2Q9UI95 211 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 TNNQ9UQP3 1299 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 TMEM131Q92545 1883 aa5.77□□□□□ -1.49
SBDSP1-204ENST00000453858 E2F8A0AVK6 867 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 CASTOR2A6NHX0 329 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 TMEM189-UBE2V1I3L0A0 370 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 PTGESO14684 152 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 ZNF217O75362 1048 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 STBD1O95210 358 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 LDOC1O95751 146 aaPredicted RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 GNLYP22749 145 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 AKAP5P24588 427 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 DUSP3P51452 185 aaPredicted RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 TRAF1Q13077 416 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 SHBQ15464 509 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 CYP27C1Q4G0S4 372 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 DCAF6Q58WW2 860 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 ZMYM1Q5SVZ6 1142 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 KDM7AQ6ZMT4 941 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 TRMT1LQ7Z2T5 733 aaKnown RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 TIPARPQ7Z3E1 657 aaKnown RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 DNAJB7Q7Z6W7 309 aaPredicted RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 CMTM8Q8IZV2 173 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 CLASRPQ8N2M8 674 aaKnown RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 ELMOD1Q8N336 334 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 TAB3Q8N5C8 712 aaPredicted RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 CADM4Q8NFZ8 388 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 HTR3CQ8WXA8 447 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 SCLT1Q96NL6 688 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 TM9SF2Q99805 663 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 ZDHHC4Q9NPG8 344 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 AFF4Q9UHB7 1163 aaKnown RBP5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 ANKRD6Q9Y2G4 727 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 CORINQ9Y5Q5 1042 aa5.76□□□□□ -1.49
SBDSP1-204ENST00000453858 RYR3Q15413 4870 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms