RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 GPC4O75487 556 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TMCC1O94876 653 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 CSPG5O95196 566 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 GTF2A2P52657 109 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 KCTD21Q4G0X4 260 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 ANKRD20A4Q4UJ75 823 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TRIM74Q86UV6 250 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TRIM73Q86UV7 250 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 LENG1Q96BZ8 264 aaPredicted RBP14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 SSU72Q9NP77 194 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 CDH22Q9UJ99 828 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TLK1Q9UKI8 766 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF541Q9H0D2 1346 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TPST1O60507 370 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 GPD1P21695 349 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 MLH1P40692 756 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 RGS2P41220 211 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 RAP1GDS1P52306 607 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 YWHAZP63104 245 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 B3GNT6Q6ZMB0 384 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TRIM67Q6ZTA4 783 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 SESTD1Q86VW0 696 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 C10orf107Q8IVU9 208 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 FAM172AQ8WUF8 416 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 SGF29Q96ES7 293 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 RPF1Q9H9Y2 349 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 POMPQ9Y244 141 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 SSX2IPQ9Y2D8 614 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 SERPINB9P50453 376 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 UNC5AQ6ZN44 842 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 CMC1Q7Z7K0 106 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 NSUN6Q8TEA1 469 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 CPXM1Q96SM3 734 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 C17orf75Q9HAS0 396 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 AP4B1Q9Y6B7 739 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ACO1P21399 889 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 GRIA1P42261 906 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 C6orf52Q5T4I8 152 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 DRICH1Q6PGQ1 229 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 SAMD3Q8N6K7 520 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 PXMP2Q9NR77 195 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 GTSE1Q9NYZ3 720 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ADAMTS6Q9UKP5 1117 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 TELO2Q9Y4R8 837 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ARAP2Q8WZ64 1704 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 GOLGA8TH3BQL2 631 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 USP12O75317 370 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 RPL5P46777 297 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ESRRGP62508 458 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 SCARA3Q6AZY7 606 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 JADE3Q92613 823 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 DGCR14Q96DF8 476 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 C7orf26Q96N11 449 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 CATSPER2Q96P56 530 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 WDR55Q9H6Y2 383 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF358Q9NW07 568 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 RPS6KL1Q9Y6S9 549 aa14.3□□□□□ -0.12
UBE2D3-210ENST00000453744 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 GLRA3O75311 464 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 ITGA2BP08514 1039 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 CPA3P15088 417 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 PDK1Q15118 436 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 PID1Q7Z2X4 250 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 MYLK4Q86YV6 388 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 SULF1Q8IWU6 871 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 NLGN1Q8N2Q7 840 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 APOL2Q9BQE5 337 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 MRPL4Q9BYD3 311 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 NRDE2Q9H7Z3 1164 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 XPNPEP1Q9NQW7 623 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 NDUFA13Q9P0J0 144 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 MT-CO1P00395 513 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 SERPINE1P05121 402 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 ARL4AP40617 200 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 TSHZ1Q6ZSZ6 1077 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 DCUN1D1Q96GG9 259 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 SLC38A10Q9HBR0 1119 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 SIGLEC16A6NMB1 481 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 NOL3O60936 208 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 PRKCBP05771 671 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 ERVK-10P10266 1014 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 HOXA10P31260 410 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 FDFT1P37268 417 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 FAM47CQ5HY64 1035 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 ANGEL2Q5VTE6 544 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 MPP5Q8N3R9 675 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 FAM156AQ8NDB6 213 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 CERKQ8TCT0 537 aa14.29□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF669Q96BR6 464 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms