RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MTMR11A4FU01 709 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 TMEM191CA6NGB0 347 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 LINC00271P0C7V0 271 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 OR1D2P34982 312 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 CA8P35219 290 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 TKTL1P51854 596 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 PMS2P54278 862 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 PPP1R15BQ5SWA1 713 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 SCUBE3Q8IX30 993 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 ZMIZ2Q8NF64 920 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.51■□□□□ 0.23
SNX17-204ENST00000453453 PGLYRP2Q96PD5 576 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 KCNK16Q96T55 309 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 PCDHA11Q9Y5I1 949 aa16.51■□□□□ 0.23
SNX17-204ENST00000453453 PAPSS1O43252 624 aaPredicted RBP16.5■□□□□ 0.23
SNX17-204ENST00000453453 SPOPO43791 374 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 DNAJB2P25686 324 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 FLT3P36888 993 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 CLNS1AP54105 237 aaKnown RBP16.5■□□□□ 0.23
SNX17-204ENST00000453453 CACNA2D1P54289 1103 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 RNASE9P60153 205 aaKnown RBP16.5■□□□□ 0.23
SNX17-204ENST00000453453 DR1Q01658 176 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 ROR1Q01973 937 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 SPRED3Q2MJR0 410 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 TNFAIP8L3Q5GJ75 292 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 TPGS2Q68CL5 300 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 OLFML1Q6UWY5 402 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
SNX17-204ENST00000453453 TAOK1Q7L7X3 1001 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 C8orf48Q96LL4 319 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 ROPN1BQ9BZX4 212 aaPredicted RBP16.5■□□□□ 0.23
SNX17-204ENST00000453453 ZBP1Q9H171 429 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 ROPN1Q9HAT0 212 aaPredicted RBP16.5■□□□□ 0.23
SNX17-204ENST00000453453 CNGB3Q9NQW8 809 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 FNIP2Q9P278 1114 aa16.5■□□□□ 0.23
SNX17-204ENST00000453453 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 F8VP50 259 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 LIN7AO14910 233 aaPredicted RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 DDX3YO15523 660 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 LPXNO60711 386 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 PROSCO94903 275 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 GJB6O95452 261 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 RB1P06400 928 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 CTSAP10619 480 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 CHN1P15882 459 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 RPL17P18621 184 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 MAN1A1P33908 653 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 SLC1A1P43005 524 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 NDUFV1P49821 464 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 RPL7AP62424 266 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 RPL10AP62906 217 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 UBE3AQ05086 875 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 PIGHQ14442 188 aaPredicted RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 RAB41Q5JT25 222 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 RNF19BQ6ZMZ0 732 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 SLC26A9Q7LBE3 791 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 ATAD1Q8NBU5 361 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 FNIP1Q8TF40 1166 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 BTBD6Q96KE9 485 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 CLSTN3Q9BQT9 956 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 C11orf84Q9BUA3 381 aaPredicted RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 EPB41L4BQ9H329 900 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 MTRF1LQ9UGC7 380 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 AFF4Q9UHB7 1163 aaKnown RBP16.49■□□□□ 0.23
SNX17-204ENST00000453453 ALG6Q9Y672 507 aa16.49■□□□□ 0.23
SNX17-204ENST00000453453 WDR27A2RRH5 827 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 HHLA1C9JL84 531 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 RGS16O15492 202 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 PSMA2P25787 234 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 CHRNA3P32297 505 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 RFC1P35251 1148 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 MGAT5BQ3V5L5 792 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 TRPM8Q7Z2W7 1104 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 TMC7Q7Z402 723 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 GDF15Q99988 308 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ULBP1Q9BZM6 244 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 GOLPH3Q9H4A6 298 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ENTPD7Q9NQZ7 604 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 TMEM30AQ9NV96 361 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ASNSD1Q9NWL6 643 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 HSFX1Q9UBD0 423 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 MYO16Q9Y6X6 1858 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 C5orf67F2Z3F1 127 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ADAM12O43184 909 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 PHF2O75151 1096 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 GABBR2O75899 941 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ZBED1O96006 694 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 CA3P07451 260 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 HAPLN1P10915 354 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 GPD1P21695 349 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 COMTP21964 271 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 IRX1P78414 480 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 ADCY1Q08828 1119 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms