RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SRRDQ9UH36 339 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 CNOT7Q9UIV1 285 aaKnown RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 N6AMT1Q9Y5N5 214 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 CDY2AQ9Y6F7 541 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 UBA6A0AVT1 1052 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SYCE3A1L190 88 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 URADA6NGE7 173 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 NOTOA8MTQ0 251 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM171A2A8MVW0 826 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 BTN3A1O00481 513 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PSPNO60542 156 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 BUB1BO60566 1050 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRPF6O94906 941 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 EFEMP2O95967 443 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 VAV1P15498 845 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 EGR1P18146 543 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TYMPP19971 482 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SP100P23497 879 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CPT2P23786 658 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 IL15P40933 162 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 BCL6P41182 706 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 GARSP41250 739 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MTIF2P46199 727 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PIP4K2AP48426 406 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 KCNJ5P48544 419 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FLT3LGP49771 235 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 HSD17B4P51659 736 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 RBM5P52756 815 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ARFIP2P53365 341 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 GMFBP60983 142 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 KCNJ10P78508 379 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF200P98182 395 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SCN1BQ07699 218 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC15Q0P6D6 951 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CETN1Q12798 172 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TDGQ13569 410 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SNX1Q13596 522 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CUL2Q13617 745 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PTK6Q13882 451 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CAMK1Q14012 370 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SYCP1Q15431 976 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 NTRK2Q16620 822 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MAPKAPK3Q16644 382 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 IMMTQ16891 758 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF628Q5EBL2 1059 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MPP7Q5T2T1 576 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TMTC4Q5T4D3 741 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 EEF1DP3Q658K8 133 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ANO7Q6IWH7 933 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ARHGAP11AQ6P4F7 1023 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM111BQ6SJ93 734 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 GADL1Q6ZQY3 521 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SYT13Q7L8C5 426 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PLPPR4Q7Z2D5 763 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ADGRG6Q86SQ4 1221 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 RSPH3Q86UC2 560 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TAX1BP1Q86VP1 789 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MON1AQ86VX9 555 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 DNAAF5Q86Y56 855 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 IRF2BP1Q8IU81 584 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ELOA2Q8IYF1 753 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 VPS52Q8N1B4 723 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 LZTR1Q8N653 840 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 VGLL2Q8N8G2 317 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FBXO15Q8NCQ5 510 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 OR2I1PQ8NGU4 316 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC110Q8TBZ0 833 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MRPS27Q92552 414 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PDLIM5Q96HC4 596 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 INTS4Q96HW7 963 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 COG3Q96JB2 828 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM81BQ96LP2 452 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FER1L6-AS2Q96M78 137 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FCRL3Q96P31 734 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 GCNAQ96QF7 691 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MMP19Q99542 508 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZPBPQ9BS86 351 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FUZQ9BT04 418 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PCDHAC1Q9H158 963 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TP63Q9H3D4 680 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 CLSTN2Q9H4D0 955 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 WDCPQ9H6R7 721 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 C17orf75Q9HAS0 396 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 PDE11AQ9HCR9 933 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF304Q9HCX3 659 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 G6PC2Q9NQR9 355 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TCP11L1Q9NUJ3 509 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 COX16Q9P0S2 106 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 STK26Q9P289 416 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FETUBQ9UGM5 382 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 IL19Q9UHD0 177 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TSPYL4Q9UJ04 414 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FBXL7Q9UJT9 491 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TMPRSS11EQ9UL52 423 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 DAPP1Q9UN19 280 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 WDR37Q9Y2I8 494 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 YBX2Q9Y2T7 364 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 MRPL11Q9Y3B7 192 aaKnown RBP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TIMM13Q9Y5L4 95 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms