RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TSPAN3O60637 253 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 CDKN2BP42772 138 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 SLC12A1Q13621 1099 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 KPNB1Q14974 876 aaKnown RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 RNF43Q68DV7 783 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 PLEKHA7Q6IQ23 1121 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 NOTUMQ6P988 496 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 IGDCC3Q8IVU1 814 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 SLC2A14Q8TDB8 520 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 E2F7Q96AV8 911 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 ZNF669Q96BR6 464 aaPredicted RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 RSAD1Q9HA92 442 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 CHKBQ9Y259 395 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 MFHAS1Q9Y4C4 1052 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 E9PBE3 544 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 KLHL41O60662 606 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 MSCO60682 206 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 TFE3P19532 575 aaPredicted RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 PPIL2Q13356 520 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 MRPL45Q9BRJ2 306 aaKnown RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 DPEP3Q9H4B8 488 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 PCDH9Q9HC56 1237 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 NKX1-2Q9UD57 310 aaPredicted RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 SPTLC1O15269 473 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 CYP2F1P24903 491 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 CASP2P42575 452 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 STX3Q13277 289 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 CAPRIN2Q6IMN6 1127 aaKnown RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 PPP1R2P3Q6NXS1 205 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 PMF1Q6P1K2 205 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 LAYNQ6UX15 382 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 ANKLE1Q8NAG6 615 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 EMID1Q96A84 441 aaPredicted RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 PRR11Q96HE9 360 aaPredicted RBP11.55□□□□□ -0.56
DDR1-239ENST00000452441 GAD1Q99259 594 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 COQ4Q9Y3A0 265 aa11.55□□□□□ -0.56
DDR1-239ENST00000452441 COL4A5P29400 1685 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 DNAJC6O75061 913 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 KRT36O76013 467 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 NCAM1P13591 858 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 SLC12A2P55011 1212 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 CUL3Q13618 768 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 RABGAP1LQ5R372 815 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 RFWD3Q6PCD5 774 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 GPR142Q7Z601 462 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 ZBED3Q96IU2 234 aaPredicted RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 MARK4Q96L34 752 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 EIF2AQ9BY44 585 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 LGALS13Q9UHV8 139 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 CYTH4Q9UIA0 394 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 ZMYND8Q9ULU4 1186 aaPredicted RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 CYP1A1P04798 512 aaPredicted RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 SNRPAP09012 282 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 VDRP11473 427 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 GOT1P17174 413 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 MGAT1P26572 445 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 SERPINB4P48594 390 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 RASA2Q15283 850 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 CCL14Q16627 93 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 TCHHL1Q5QJ38 904 aaPredicted RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 TMCO4Q5TGY1 634 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 NAIF1Q69YI7 327 aaPredicted RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 ASRGL1Q7L266 308 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 CMC1Q7Z7K0 106 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 RASSF3Q86WH2 238 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 WDR75Q8IWA0 830 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 PDCD6IPQ8WUM4 868 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 AZIN2Q96A70 460 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 C12orf42Q96LP6 360 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 SNRNP25Q9BV90 132 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 ZCWPW1Q9H0M4 648 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 AP4E1Q9UPM8 1137 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 AK5Q9Y6K8 562 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 SLC4A7Q9Y6M7 1214 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 ASMTLO95671 621 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 ALADP13716 330 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 ADIGQ0VDE8 80 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 UBAP2LQ14157 1087 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 PPM1JQ5JR12 505 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 VWA5B1Q5TIE3 1220 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 STKLD1Q8NE28 680 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 UTP4Q969X6 686 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 ARL8BQ9NVJ2 186 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 WDR35Q9P2L0 1181 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 SLC39A10Q9ULF5 831 aa11.54□□□□□ -0.56
DDR1-239ENST00000452441 APOBEC2Q9Y235 224 aaKnown RBP11.54□□□□□ -0.56
DDR1-239ENST00000452441 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 FCHO1O14526 889 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms