RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 SFMBT1Q9UHJ3 866 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 SLC12A6Q9UHW9 1150 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 NDRG2Q9UN36 371 aaKnown RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 NAALADL1Q9UQQ1 740 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 LUC7L2Q9Y383 392 aaKnown RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 BZW2Q9Y6E2 419 aaKnown RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 LRRC53A6NM62 1247 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 GREM1O60565 184 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 LATS1O95835 1130 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 ERBB2P04626 1255 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CYBBP04839 570 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 FYNP06241 537 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DCNP07585 359 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 TPM1P09493 284 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DRD1P21728 446 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 TARSP26639 723 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CORO1AP31146 461 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 NOS2P35228 1153 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SCNN1AP37088 669 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 PBX1P40424 430 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 RPS9P46781 194 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SOX9P48436 509 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SLC11A2P49281 568 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 TBX4P57082 545 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 NOMO3P69849 1222 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 ZBED6P86452 979 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 FMO1Q01740 532 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 RING1Q06587 406 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 KLHL30Q0D2K2 578 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 MTA1Q13330 715 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 NNTQ13423 1086 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 PON2Q15165 354 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CLEC16AQ2KHT3 1053 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 TSR1Q2NL82 804 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 ANO4Q32M45 955 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 FBXO43Q4G163 708 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 GLIPR1L2Q4G1C9 344 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 PTPN20Q4JDL3 420 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DCAF6Q58WW2 860 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 LY6G5CQ5SRR4 150 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SYPL2Q5VXT5 272 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 NAA35Q5VZE5 725 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 NUGGCQ68CJ6 796 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CWF19L1Q69YN2 538 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 FAM183BPQ6ZVS7 135 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SLC26A9Q7LBE3 791 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DENND1CQ8IV53 801 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DEFB106AQ8N104 65 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DTWD2Q8NBA8 298 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SLC20A1Q8WUM9 679 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CPLX3Q8WVH0 158 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SYN2Q92777 582 aaPredicted RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CD101Q93033 1021 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 WBP2Q969T9 261 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 AZIN2Q96A70 460 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CLDN23Q96B33 292 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 XPO6Q96QU8 1125 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 DDX50Q9BQ39 737 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 IRX2Q9BZI1 471 aaPredicted RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 IRF2BPLQ9H1B7 796 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 ADAM22Q9P0K1 906 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 AGO1Q9UL18 857 aaKnown RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 CAPN11Q9UMQ6 739 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
COL8A1-203ENST00000452013 MTF2Q9Y483 593 aaPredicted RBP9.26□□□□□ -0.93
COL8A1-203ENST00000452013 OTOL1A6NHN0 477 aaPredicted RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 SHISA7A6NL88 538 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 SCAMP3O14828 347 aaKnown RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 HOXC11O43248 304 aaPredicted RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 ATG13O75143 517 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TRUB2O95900 331 aaKnown RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 F9P00740 461 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 KLKB1P03952 638 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 CYP17A1P05093 508 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 CALB1P05937 261 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 SLC2A3P11169 496 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 CHRNB1P11230 501 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 ADH5P11766 374 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 UNGP13051 313 aaPredicted RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 MMP8P22894 467 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 EIF2DP41214 584 aaKnown RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 PRKCIP41743 596 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 MATKP42679 507 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 VCPP55072 806 aaKnown RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 RNASE9P60153 205 aaKnown RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TRIM14Q14142 442 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TAF5Q15542 800 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 MPPE1Q53F39 396 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TMEM196Q5HYL7 178 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 SPECC1LQ69YQ0 1117 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 ACAD10Q6JQN1 1059 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TXNDC11Q6PKC3 985 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 OLFML1Q6UWY5 402 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 Q6ZNB5 142 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms