RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 FOXB2Q5VYV0 432 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 DENND2CQ68D51 928 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 VASNQ6EMK4 673 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 H2AFVQ71UI9 128 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PEX26Q7Z412 305 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPATA21Q7Z572 469 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIF2BQ8N4N8 673 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 STPG3Q8N7X2 389 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PRELID2Q8N945 189 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM133AQ8N9E0 248 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MIGA1Q8NAN2 632 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 LNX1Q8TBB1 728 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 FBXO25Q8TCJ0 367 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PIGOQ8TEQ8 1089 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SDR42E1Q8WUS8 393 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 KCTD13Q8WZ19 329 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 LARP4BQ92615 738 aaKnown RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLCO2A1Q92959 643 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 GRAMD1AQ96CP6 724 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 DTNBP1Q96EV8 351 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 RMDN2Q96LZ7 410 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAGEB18Q96M61 343 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SERPINB12Q96P63 405 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 WRNIP1Q96S55 665 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PLIN2Q99541 437 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TSC22D3Q99576 134 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 KCNJ15Q99712 375 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TSG101Q99816 390 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MENTQ9BUN1 341 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC28BQ9BUN5 200 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TIPINQ9BVW5 301 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPZ1Q9BXG8 430 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF341Q9BYN7 854 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRC27Q9C0I9 530 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 YIPF3Q9GZM5 350 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMX4Q9H1E5 349 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SEMA4AQ9H3S1 761 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 GOLPH3Q9H4A6 298 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 ERVK-5Q9HDB9 667 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 IL17RBQ9NRM6 502 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 FGFR1OP2Q9NVK5 253 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 DDX43Q9NXZ2 648 aaKnown RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SEC63Q9UGP8 760 aaKnown RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAD2L2Q9UI95 211 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRAF3IP3Q9Y228 551 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 ATP8A1Q9Y2Q0 1164 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 C2CD2Q9Y426 696 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 DAAM1Q9Y4D1 1078 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TESMINQ9Y4I5 508 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC4A7Q9Y6M7 1214 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 RPS6KL1Q9Y6S9 549 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PCDH11YQ9BZA8 1340 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PHLPP1O60346 1717 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 A0A1W2PQU0 124 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TCP11X1B4DZS4 312 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 PODXLO00592 558 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 RASGRF2O14827 1237 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DLX3O60479 287 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 NMT2O60551 498 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 HIP1RO75146 1068 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 PHF2O75151 1096 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 MTA2O94776 668 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 GGPS1O95749 300 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 LMNAP02545 664 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 FGGP02679 453 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 GSTA2P09210 222 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 UCHL3P15374 230 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TAC1P20366 129 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 MUTP22033 750 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 PON1P27169 355 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 CHRNA3P32297 505 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 FOXN2P32314 431 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 RPL21P46778 160 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DYNLL1P63167 89 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DR1Q01658 176 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 KLC1Q07866 573 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 COASYQ13057 564 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DYNC1I2Q13409 638 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TUSC3Q13454 348 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 RAPGEF1Q13905 1077 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 GIT2Q14161 759 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 RRP1BQ14684 758 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 R3HDM1Q15032 1099 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 NONOQ15233 471 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 SMAD2Q15796 467 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 NFIL3Q16649 462 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC142Q17RM4 750 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 BMT2Q1RMZ1 405 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 PAN2Q504Q3 1202 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TTC27Q6P3X3 843 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 USP53Q70EK8 1073 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 EPM2AIP1Q7L775 607 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TAOK1Q7L7X3 1001 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 OTOP3Q7RTS5 596 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 KCNK18Q7Z418 384 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 NEK8Q86SG6 692 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 LMNTD2Q8IXW0 634 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 MYOCDQ8IZQ8 938 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms