RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CORO6Q6QEF8 472 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 KLHL17Q6TDP4 642 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 IDO2Q6ZQW0 420 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCDC149Q6ZUS6 474 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RRM2BQ7LG56 351 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TMEM17Q86X19 198 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RFX6Q8HWS3 928 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RHPN2Q8IUC4 686 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 REXO1Q8N1G1 1221 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 FAM109AQ8N4B1 249 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PI4KAP1Q8N8J0 262 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RP9Q8TA86 221 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 TTC8Q8TAM2 541 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ANKRD49Q8WVL7 239 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 JPH3Q8WXH2 748 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 ZSWIM1Q9BR11 485 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DCUN1D5Q9BTE7 237 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 C2orf49Q9BVC5 232 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 BBS2Q9BXC9 721 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZNF717Q9BY31 904 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 ANO3Q9BYT9 981 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MKRN2Q9H000 416 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 SLC22A4Q9H015 551 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CDC42EP4Q9H3Q1 356 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 IFT22Q9H7X7 185 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CHMP1AQ9HD42 196 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 MLXIPLQ9NP71 852 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SNRKQ9NRH2 765 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PKD2L1Q9P0L9 805 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ARPP21Q9UBL0 812 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 VAV3Q9UKW4 847 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 INPP5FQ9Y2H2 1132 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PPME1Q9Y570 386 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 V9GYQ6 96 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SPEF2Q9C093 1822 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TMEM94Q12767 1356 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MEI4A8MW99 385 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RBAK-RBAKDNI3L0D1 243 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HUS1O60921 280 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ARHGEF15O94989 841 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MPOP05164 745 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ETS2P15036 469 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ATF7P17544 494 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 GARTP22102 1010 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PIK3R1P27986 724 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HNRNPH3P31942 346 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 GRIA2P42262 883 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRCPP42785 496 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TPTEP56180 551 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRKCEQ02156 737 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF45Q02386 682 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HSF2Q03933 536 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FMR1Q06787 632 aaKnown RBP eCLIP2.26□□□□□ -2.05
USP53-202ENST00000450251 TFCP2Q12800 502 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CDC16Q13042 620 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRKG1Q13976 671 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SELPLGQ14242 412 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ADGRE1Q14246 886 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GALNT3Q14435 633 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 EPHA7Q15375 998 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UBE3CQ15386 1083 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 QPCTQ16769 361 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TBRG1Q3YBR2 411 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AKAP4Q5JQC9 854 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GNASQ5JWF2 1037 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GALNT18Q6P9A2 607 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CCDC81Q6ZN84 652 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RASSF6Q6ZTQ3 369 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 USP43Q70EL4 1123 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLCO6A1Q86UG4 719 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TICAM1Q8IUC6 712 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SIRT2Q8IXJ6 389 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GALNT12Q8IXK2 581 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DCLK2Q8N568 766 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FANCBQ8NB91 859 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DNAJA4Q8WW22 397 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ART4Q93070 314 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TCEAL3Q969E4 200 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF560Q96MR9 790 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF347Q96SE7 839 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LPIN3Q9BQK8 851 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MKNK1Q9BUB5 465 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HERC2P3Q9BVR0 1158 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GON7Q9BXV9 100 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT2B28Q9BY64 529 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AKAP7Q9P0M2 348 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ANKMY1Q9P2S6 941 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRKAG3Q9UGI9 489 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GGT7Q9UJ14 662 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PNMA3Q9UL41 463 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NEU2Q9Y3R4 380 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LMO7Q8WWI1 1683 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IFT172Q9UG01 1749 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PNMA6EA0A0J9YXQ4 647 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 METTL21EPA6NDL7 271 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PCP4L1A6NKN8 68 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM196BA6NMK8 535 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PPP1R3GB7ZBB8 358 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 H7C2Y5 167 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TSPAN4O14817 238 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms