RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NCK2O43639 380 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NMT2O60551 498 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CTNND1O60716 968 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 PPP1R11O60927 126 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 FKTNO75072 461 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATP9AO75110 1047 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MFAP3LO75121 409 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CNOT3O75175 753 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 FGF18O76093 207 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TOMM70O94826 608 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 KRT6AP02538 564 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 AFPP02771 609 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 KRT6BP04259 564 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CYP17A1P05093 508 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 PDHA1P08559 390 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 INHBBP09529 407 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SMIM18P0DKX4 95 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 PTX3P26022 381 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ANXA13P27216 316 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CRABP2P29373 138 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SERPINB3P29508 390 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MARCKSP29966 332 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NUDT1P36639 197 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MMP13P45452 471 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CBX5P45973 191 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 RXRGP48443 463 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 GSSP48637 474 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TMED10P49755 219 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 GALK1P51570 392 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 HNRNPMP52272 730 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 VAV2P52735 878 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 RAD23BP54727 409 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MLLT6P55198 1093 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 UBXN2AP68543 259 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 XIAPP98170 497 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SPIRE1Q08AE8 756 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 APOFQ13790 326 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 IDI1Q13907 227 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 PRKG1Q13976 671 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 RCN2Q14257 317 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NFE2L1Q14494 772 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 LPIN1Q14693 890 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MTF1Q14872 753 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 KARSQ15046 597 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 UBE3CQ15386 1083 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CLUL1Q15846 466 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 GPR162Q16538 588 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 IMMTQ16891 758 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SKIDA1Q1XH10 827 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZC2HC1CQ53FD0 456 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATAT1Q5SQI0 421 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 IFIT1BQ5T764 474 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NT5DC1Q5TFE4 455 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CDKAL1Q5VV42 579 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TCERG1LQ5VWI1 586 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 RWDD4Q6NW29 188 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ESRP1Q6NXG1 681 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CEP85Q6P2H3 762 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 FAM173BQ6P4H8 233 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 INTS5Q6P9B9 1019 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 RANBP10Q6VN20 620 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 STOX1Q6ZVD7 989 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 RFPL4BQ6ZWI9 263 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 INTS8Q75QN2 995 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CEP68Q76N32 757 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TAOK1Q7L7X3 1001 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 OTOP3Q7RTS5 596 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 LONP2Q86WA8 852 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 DTX1Q86Y01 620 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 GSPT2Q8IYD1 628 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SLC38A6Q8IZM9 456 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CSGALNACT2Q8N6G5 542 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TMCO5AQ8N6Q1 288 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NAT16Q8N8M0 369 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ANKRD53Q8N9V6 530 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 USP38Q8NB14 1042 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 DDHD1Q8NEL9 900 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TNIP2Q8NFZ5 429 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 EXD1Q8NHP7 514 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 PIP4K2CQ8TBX8 421 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CAGE1Q8TC20 777 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SLC2A14Q8TDB8 520 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SH3RF2Q8TEC5 729 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 AFG1LQ8WV93 481 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NRG4Q8WWG1 115 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 SEC14L1Q92503 715 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MRPS27Q92552 414 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 UBE2FQ969M7 185 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 FERMT2Q96AC1 680 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CCDC127Q96BQ5 260 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 INTS12Q96CB8 462 aaKnown RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 KLHL29Q96CT2 875 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZNF274Q96GC6 653 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CEP95Q96GE4 821 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 TMEM169Q96HH4 297 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 CEP19Q96LK0 163 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 MFSD14AQ96MC6 490 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 HSPA12BQ96MM6 686 aa3.78□□□□□ -1.8
HMGB3P8-201ENST00000449709 NEUROD6Q96NK8 337 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms