RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 STRADAQ7RTN6 431 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 BNIPLQ7Z465 357 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 ARL14EPQ8N8R7 260 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-210ENST00000449116 MAB21L3Q8N8X9 362 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-210ENST00000449116 ADAM32Q8TC27 787 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 FAM172AQ8WUF8 416 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 NECTIN4Q96NY8 510 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 NCAPGQ9BPX3 1015 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 SLC46A2Q9BY10 475 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 ADAM33Q9BZ11 813 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 RNF38Q9H0F5 515 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 DDIT4Q9NX09 232 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 MARCH2Q9P0N8 246 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 RASAL2Q9UJF2 1139 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 CAPN6Q9Y6Q1 641 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 C2orf16Q68DN1 1984 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 OBSL1O75147 1896 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 GRID2IPA4D2P6 1211 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 H3BQ06 376 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-210ENST00000449116 IRAK2O43187 625 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 PALMO75781 387 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 RNF8O76064 485 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 F9P00740 461 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 CKMP06732 381 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 MBL2P11226 248 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-210ENST00000449116 TFE3P19532 575 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-210ENST00000449116 KCNA5P22460 613 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 SLC1A1P43005 524 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 KPNA1P52294 538 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-210ENST00000449116 DEUP1Q05D60 604 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 NME3Q13232 169 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 NNTQ13423 1086 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 SH3PXD2AQ5TCZ1 1133 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 GET4Q7L5D6 327 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-210ENST00000449116 DAAM2Q86T65 1068 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 ZSCAN30Q86W11 494 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 MIB1Q86YT6 1006 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 SYCE1Q8N0S2 351 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 LRRC57Q8N9N7 239 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 TRIM58Q8NG06 486 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 ING5Q8WYH8 240 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 HLA-CQ95604 372 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 CYP2S1Q96SQ9 504 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 CALCOCO1Q9P1Z2 691 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 USTQ9Y2C2 406 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 ALG6Q9Y672 507 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 SPTBN5Q9NRC6 3674 aaKnown RBP15.25■□□□□ 0.03
SHANK2-210ENST00000449116 ANAPC1Q9H1A4 1944 aa15.25■□□□□ 0.03
SHANK2-210ENST00000449116 DOCK6Q96HP0 2047 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SYNJ2BP-COX16A0A087WUM0 186 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SLC12A8A0AV02 714 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 MSI1O43347 362 aaKnown RBP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 KIF5CO60282 957 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 LRCH4O75427 683 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 PCK1P35558 622 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 AVPR1AP37288 418 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 HDAC4P56524 1084 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SLC7A9P82251 487 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 EIF4EBP2Q13542 120 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 TRIP4Q15650 581 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SND1Q7KZF4 910 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SLFN11Q7Z7L1 901 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 NPAS3Q8IXF0 933 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 CMTM8Q8IZV2 173 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SUSD6Q92537 303 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 SLC22A12Q96S37 553 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 IRX2Q9BZI1 471 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 PIGVQ9NUD9 493 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■□□ 16.3
SHANK2-210ENST00000449116 COX16Q9P0S2 106 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 TLR6Q9Y2C9 796 aa15.24■□□□□ 0.03
SHANK2-210ENST00000449116 HBS1LQ9Y450 684 aaKnown RBP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 USP15Q9Y4E8 981 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-210ENST00000449116 DENND4CQ5VZ89 1909 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 SPOPO43791 374 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 COMTP21964 271 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 WEE1P30291 646 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 ATXN1P54253 815 aaKnown RBP15.23■□□□□ 0.03
SHANK2-210ENST00000449116 TBX4P57082 545 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 COG7P83436 770 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 SMAD4Q13485 552 aaKnown RBP15.23■□□□□ 0.03
SHANK2-210ENST00000449116 CBX2Q14781 532 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-210ENST00000449116 RAB6CQ53S08 254 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 DAB2IPQ5VWQ8 1189 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 CC2D1AQ6P1N0 951 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-210ENST00000449116 ARFGAP1Q8N6T3 406 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 FGF13Q92913 245 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 KLF16Q9BXK1 252 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-210ENST00000449116 RAB6CQ9H0N0 254 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 GOLPH3Q9H4A6 298 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 POMKQ9H5K3 350 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 GDE1Q9NZC3 331 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 ARHGAP26Q9UNA1 814 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 CPQQ9Y646 472 aa15.23■□□□□ 0.03
SHANK2-210ENST00000449116 PRPSAP2O60256 369 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms