RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 AASDHQ4L235 1098 aaPredicted RBP20.64■□□□□ 0.89
VCP-203ENST00000448530 LCLAT1Q6UWP7 414 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 TRIM59Q8IWR1 403 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 PGBD3Q8N328 593 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 KIAA1468Q9P260 1216 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 TCRBV21S2A2A0A5A6 115 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 TRIM24O15164 1050 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 CYBBP04839 570 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 ZNF806P0C7X5 589 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 MPLP40238 635 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 MARSP56192 900 aaKnown RBP20.63■□□□□ 0.89
VCP-203ENST00000448530 CREB5Q02930 508 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 BYSLQ13895 437 aaKnown RBP20.63■□□□□ 0.89
VCP-203ENST00000448530 CCDC6Q16204 474 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 RRAGAQ7L523 313 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 RBBP8NLQ8NC74 664 aaPredicted RBP20.63■□□□□ 0.89
VCP-203ENST00000448530 EHBP1Q8NDI1 1231 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 HMGB4Q8WW32 186 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 KCTD13Q8WZ19 329 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 SPACA7Q96KW9 195 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 VPS45Q9NRW7 570 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 THADAQ6YHU6 1953 aa20.63■□□□□ 0.89
VCP-203ENST00000448530 MAP3K13O43283 966 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 ADAM23O75077 832 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 KLKB1P03952 638 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 CHRM1P11229 460 aaPredicted RBP20.62■□□□□ 0.89
VCP-203ENST00000448530 LCP1P13796 627 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 HNRNPLP14866 589 aaKnown RBP eCLIP20.62■□□□□ 0.89
VCP-203ENST00000448530 NTSR1P30989 418 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 GCNT1Q02742 428 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 SF3A2Q15428 464 aaKnown RBP20.62■□□□□ 0.89
VCP-203ENST00000448530 CNGA2Q16280 664 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 CREBRFQ8IUR6 639 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 DENND1CQ8IV53 801 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 CHPFQ8IZ52 775 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 LMO3Q8TAP4 145 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 TFAP2BQ92481 460 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 NDRG1Q92597 394 aaKnown RBP20.62■□□□□ 0.89
VCP-203ENST00000448530 KAT5Q92993 513 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 PLD4Q96BZ4 506 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 INTS2Q9H0H0 1204 aaKnown RBP20.62■□□□□ 0.89
VCP-203ENST00000448530 CNGB3Q9NQW8 809 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 PLK2Q9NYY3 685 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 RWDD2AQ9UIY3 292 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 STARD13Q9Y3M8 1113 aa20.62■□□□□ 0.89
VCP-203ENST00000448530 M0QYV0 167 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 SLC30A4O14863 429 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 HOXB2P14652 356 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 BRD2P25440 801 aaKnown RBP20.61■□□□□ 0.89
VCP-203ENST00000448530 WASP42768 502 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 HARS2P49590 506 aaKnown RBP20.61■□□□□ 0.89
VCP-203ENST00000448530 BSPRYQ5W0U4 402 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 ARHGEF19Q8IW93 802 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 GOLGA1Q92805 767 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 ABCC13Q9NSE7 274 aa20.61■□□□□ 0.89
VCP-203ENST00000448530 AGO1Q9UL18 857 aaKnown RBP20.61■□□□□ 0.89
VCP-203ENST00000448530 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.61■□□□□ 0.89
VCP-203ENST00000448530 RNF225M0QZC1 329 aaPredicted RBP20.6■□□□□ 0.89
VCP-203ENST00000448530 GDF9O60383 454 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 KRT5P13647 590 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 RGS7P49802 495 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 PKDCCQ504Y2 493 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 EGFLAMQ63HQ2 1017 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 PMS2CLQ68D20 193 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 TOGARAM2Q6ZUX3 1019 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 FMNL3Q8IVF7 1028 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 OLIG1Q8TAK6 271 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 EDEM1Q92611 657 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 HBS1LQ9Y450 684 aaKnown RBP20.6■□□□□ 0.89
VCP-203ENST00000448530 ABCA7Q8IZY2 2146 aa20.6■□□□□ 0.89
VCP-203ENST00000448530 BCLAF3A2AJT9 711 aaKnown RBP20.59■□□□□ 0.89
VCP-203ENST00000448530 DCDC2BA2VCK2 349 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 YJEFN3A6XGL0 299 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 E7ENQ6 273 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 CAVIN2O95810 425 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 PENKP01210 267 aaPredicted RBP20.59■□□□□ 0.89
VCP-203ENST00000448530 CISD3P0C7P0 127 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 P2RY2P41231 377 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 DHPSP49366 369 aaPredicted RBP20.59■□□□□ 0.89
VCP-203ENST00000448530 DAOAP59103 153 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 PLA2G2CQ5R387 149 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 IL31Q6EBC2 164 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 LPCAT2Q7L5N7 544 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 BHLHA9Q7RTU4 235 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 CYP2U1Q7Z449 544 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 SCML4Q8N228 414 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 CPXM2Q8N436 756 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 DDI1Q8WTU0 396 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 SLC35F5Q8WV83 523 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 RLN3Q8WXF3 142 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 IRGQQ8WZA9 623 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 UBE2TQ9NPD8 197 aaPredicted RBP20.59■□□□□ 0.89
VCP-203ENST00000448530 NUP205Q92621 2012 aa20.59■□□□□ 0.89
VCP-203ENST00000448530 MED19A0JLT2 244 aaPredicted RBP20.58■□□□□ 0.89
VCP-203ENST00000448530 PRRT4C9JH25 899 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 PIK3R2O00459 728 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 BCKDHBP21953 392 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 E2F5Q15329 346 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 TRIP4Q15650 581 aaPredicted RBP20.58■□□□□ 0.89
VCP-203ENST00000448530 TPD52L1Q16890 204 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms