RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ARHGEF4Q9NR80 690 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 ACEP12821 1306 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 TMEM120BA0PK00 339 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 M0QYV0 167 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 RTN2O75298 545 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 BPNT1O95861 308 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 SERPINF2P08697 491 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 TPRP12270 2363 aaKnown RBP9.17□□□□□ -0.94
NIPBL-202ENST00000448238 DLG4P78352 724 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 PGS1Q32NB8 556 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 WDR59Q6PJI9 974 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 AFTPHQ6ULP2 937 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 DSG4Q86SJ6 1040 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 STK32CQ86UX6 486 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 C18orf8Q96DM3 657 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 INTS2Q9H0H0 1204 aaKnown RBP9.17□□□□□ -0.94
NIPBL-202ENST00000448238 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.17□□□□□ -0.94
NIPBL-202ENST00000448238 PPIEQ9UNP9 301 aaKnown RBP9.17□□□□□ -0.94
NIPBL-202ENST00000448238 ALG5Q9Y673 324 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 CARMIL3Q8ND23 1372 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 FAM240BA0A1B0GVZ2 78 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 RHPN2P1A8MT19 583 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 TIMM10P62072 90 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 SKIV2LQ15477 1246 aaKnown RBP9.17□□□□□ -0.94
NIPBL-202ENST00000448238 KRT28Q7Z3Y7 464 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 LPCAT1Q8NF37 534 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 SGCDQ92629 289 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 CNKSR1Q969H4 720 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 DCUN1D5Q9BTE7 237 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 GANQ9H2C0 597 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 PCSK1NQ9UHG2 260 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 PSME2Q9UL46 239 aa9.17□□□□□ -0.94
NIPBL-202ENST00000448238 SAMD4AQ9UPU9 718 aaKnown RBP9.17□□□□□ -0.94
NIPBL-202ENST00000448238 SSX4O60224 188 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CPA1P15085 419 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SLC9A4Q6AI14 798 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 WDR93Q6P2C0 686 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 QSOX2Q6ZRP7 698 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 KCTD17Q8N5Z5 321 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SPATA4Q8NEY3 305 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 GPRASP2Q96D09 838 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MRPL4Q9BYD3 311 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MED28Q9H204 178 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SMURF2Q9HAU4 748 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 GPAMQ9HCL2 828 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CROTQ9UKG9 612 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 GDAQ9Y2T3 454 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 AIPO00170 330 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 RNASEH1O60930 286 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 OGNP20774 298 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 FGFR2P21802 821 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 EFHC1Q5JVL4 640 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 BROXQ5VW32 411 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MTSS1LQ765P7 747 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 GRAMD1CQ8IYS0 662 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CRYL1Q9Y2S2 319 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SNX8Q9Y5X2 465 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 LGALS16A8MUM7 142 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 GLRA3O75311 464 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 RAD17O75943 681 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 RBP1P09455 135 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 TAF5Q15542 800 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CDKL4Q5MAI5 379 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 PAPD7Q5XG87 772 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 IZUMO2Q6UXV1 221 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 NFATC2IPQ8NCF5 419 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 PPP1R10Q96QC0 940 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SCUBE2Q9NQ36 999 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CORO2BQ9UQ03 480 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MROH7Q68CQ1 1323 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 H7C2Y5 167 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SLC25A12O75746 678 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CYB5AP00167 134 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 GYS2P54840 703 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 HSDL1Q3SXM5 330 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 OAFQ86UD1 273 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 C8orf59Q8N0T1 100 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 YME1L1Q96TA2 773 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 EPB41L1Q9H4G0 881 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ABCB10Q9NRK6 738 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 FBXO40Q9UH90 709 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 USP17L21D6R901 530 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 OPLAHO14841 1288 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SRGAP2O75044 1071 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 IL2RBP14784 551 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SERPINB5P36952 375 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ZNF234Q14588 700 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 DPCR1Q3MIW9 517 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CWF19L1Q69YN2 538 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 PNPT1Q8TCS8 783 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 UCMAQ8WVF2 138 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 TCEAL3Q969E4 200 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 C16orf58Q96GQ5 468 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 RPRD1AQ96P16 312 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms