RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 NOVP48745 357 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 GEMIN4P57678 1058 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 RPL7AP62424 266 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SYTL3Q4VX76 610 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ZC3H12AQ5D1E8 599 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TMTC4Q5T4D3 741 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 MROH9Q5TGP6 573 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SDHAF4Q5VUM1 108 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 FICDQ9BVA6 458 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 DUSP16Q9BY84 665 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 GTF2IRD1Q9UHL9 959 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 NCANO14594 1321 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SCNN1BP51168 640 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CCDC15Q0P6D6 951 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SLC10A6Q3KNW5 377 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 AGBL2Q5U5Z8 902 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CCNJLQ8IV13 435 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 RIBC1Q8N443 379 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 AGR3Q8TD06 166 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HNRNPLLQ8WVV9 542 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HTR3CQ8WXA8 447 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SNX27Q96L92 541 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TTPALQ9BTX7 342 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 NUF2Q9BZD4 464 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TASP1Q9H6P5 420 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ATP13A1Q9HD20 1204 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 DNPEPQ9ULA0 475 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SLC4A7Q9Y6M7 1214 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 OR6C75A6NL08 312 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 XPO1O14980 1071 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CFLARO15519 480 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 NOL4O94818 638 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 PYGLP06737 847 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SLC10A3P09131 477 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CSH1P0DML2 217 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CSH2P0DML3 217 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 RARGP13631 454 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CCND3P30281 292 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CREMQ03060 361 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 DDR2Q16832 855 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HECTD3Q5T447 861 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 RETSATQ6NUM9 610 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 KCNT2Q6UVM3 1135 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 LRRC6Q86X45 466 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ANKRD7Q92527 254 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TMA16Q96EY4 203 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 RSRC1Q96IZ7 334 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ZBTB18Q99592 522 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 LRRC40Q9H9A6 602 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 OR12D3Q9UGF7 316 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CRLS1Q9UJA2 301 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SLC39A10Q9ULF5 831 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TLL2Q9Y6L7 1015 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ARL5CA6NH57 179 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 FAM47DPA6NHR8 397 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 KCNK1O00180 336 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CILPO75339 1184 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SYF2O95926 243 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ADH1AP07327 375 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HIST1H2AGP0C0S8 130 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CHN1P15882 459 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HIST1H2ADP20671 130 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 OR1D2P34982 312 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CLCNKBP51801 687 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ARFIP2P53365 341 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 FSCBQ5H9T9 825 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 OTOP2Q7RTS6 562 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 PDCD7Q8N8D1 485 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HIST1H2AHQ96KK5 128 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 HIST1H2AJQ99878 128 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TACO1Q9BSH4 297 aaKnown RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 NAT9Q9BTE0 207 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 H2AFJQ9BTM1 129 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TMEM51Q9NW97 253 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 APOC4-APOC2K7ER74 178 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 APOC2P02655 101 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 CHRM3P20309 590 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 MAP4P27816 1152 aaKnown RBP7.63□□□□□ -1.19
SYNE1-213ENST00000448038 RENBPP51606 427 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 ZNF135P52742 658 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-213ENST00000448038 RBBP7Q16576 425 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 AADACL2Q6P093 401 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 NLRP14Q86W24 1093 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 CREG2Q8IUH2 290 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 PDZD8Q8NEN9 1154 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 DBF4BQ8NFT6 615 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 PRMT1Q99873 361 aaKnown RBP7.63□□□□□ -1.19
SYNE1-213ENST00000448038 PLA2G4CQ9UP65 541 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 TOGARAM1Q9Y4F4 1720 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 NAV1Q8NEY1 1877 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 CCDC85CA6NKD9 419 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 BTNL10A8MVZ5 291 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 IGF2BP3O00425 579 aaKnown RBP eCLIP7.63□□□□□ -1.19
SYNE1-213ENST00000448038 CYP3A5P20815 502 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 PSEN1P49768 467 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 MAP3K10Q02779 954 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 PCDHB18PQ96TA0 734 aa7.63□□□□□ -1.19
SYNE1-213ENST00000448038 SNRNP25Q9BV90 132 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms