RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 DEFB106AQ8N104 65 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 SIX5Q8N196 739 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 SMARCD2Q92925 531 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 E2F7Q96AV8 911 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 CYP2S1Q96SQ9 504 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 THAP2Q9H0W7 228 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 FAM204AQ9H8W3 233 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 METTL5Q9NRN9 209 aaKnown RBP12.1□□□□□ -0.47
LINC00408-201ENST00000447784 TMEM51Q9NW97 253 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 OSER1Q9NX31 292 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 INTUQ9ULD6 942 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 PCDHA13Q9Y5I0 950 aa12.1□□□□□ -0.47
LINC00408-201ENST00000447784 KRBA1A5PL33 1030 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 DAB1O75553 588 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 TBX18O95935 607 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 OAS1P00973 400 aaKnown RBP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 TMEM253P0C7T8 217 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 PDGFRAP16234 1089 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 WEE1P30291 646 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 NOS2P35228 1153 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 PGFP49763 221 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 COG7P83436 770 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 MAMLD1Q13495 774 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 MTF1Q14872 753 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 ARCQ7LC44 396 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 ARID3BQ8IVW6 561 aaPredicted RBP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 ST13P5Q8NFI4 369 aaPredicted RBP12.09□□□□□ -0.47
LINC00408-201ENST00000447784 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 RNF34Q969K3 372 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 SHDQ96IW2 340 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 ZSWIM3Q96MP5 696 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 SERPINB11Q96P15 392 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 MCEEQ96PE7 176 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 SLC2A13Q96QE2 648 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 KXD1Q9BQD3 176 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 ARHGEF3Q9NR81 526 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 TDP1Q9NUW8 608 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 SMPD4Q9NXE4 827 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 TMEM59LQ9UK28 342 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 CPQQ9Y646 472 aa12.09□□□□□ -0.47
LINC00408-201ENST00000447784 TRIOO75962 3097 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SLC12A8A0AV02 714 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 LCA5LO95447 670 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 F9P00740 461 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 CYP1A2P05177 515 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 AOC1P19801 751 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 GPD1P21695 349 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 PLA2G5P39877 138 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SULT1E1P49888 294 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 STARD6P59095 220 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SLC7A9P82251 487 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 PRKCQQ04759 706 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 IER5LQ5T953 404 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SYPL2Q5VXT5 272 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 CC2D1AQ6P1N0 951 aaPredicted RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 TMEM139Q8IV31 216 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 YAF2Q8IY57 180 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 EMC1Q8N766 993 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 TMEM105Q8N8V8 129 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 FLCNQ8NFG4 579 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 DQX1Q8TE96 717 aaKnown RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 RXFP2Q8WXD0 754 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 DNASE1L2Q92874 299 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 PIWIL1Q96J94 861 aaKnown RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 PPP1R9BQ96SB3 815 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 NUP85Q9BW27 656 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 PLA2G2FQ9BZM2 168 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 RNF38Q9H0F5 515 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SMG9Q9H0W8 520 aaKnown RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 TRPV5Q9NQA5 729 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 THG1LQ9NWX6 298 aaKnown RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 DDIT4Q9NX09 232 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 LSM7Q9UK45 103 aaKnown RBP12.08□□□□□ -0.48
LINC00408-201ENST00000447784 CA14Q9ULX7 337 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 NENFQ9UMX5 172 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 ARHGAP26Q9UNA1 814 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SH3BP1Q9Y3L3 701 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 PAXBP1Q9Y5B6 917 aa12.08□□□□□ -0.48
LINC00408-201ENST00000447784 SYNJ2BP-COX16A0A087WUM0 186 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 M0QYT0 321 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 MDM4O15151 490 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms